KEGG   Pan paniscus (bonobo): 100985770
Entry
100985770         CDS       T02283                                 
Symbol
LIMCH1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X16
  KO
K24422  LIM and calponin homology domains-containing protein 1
Organism
pps  Pan paniscus (bonobo)
Brite
KEGG Orthology (KO) [BR:pps00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:pps04990]
    100985770 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:pps04990]
 LIM domain-containing proteins
  Other lim domain-containing proteins
   100985770 (LIMCH1)
SSDB
Motif
Pfam: DUF4757 CH LIM
Other DBs
NCBI-GeneID: 100985770
NCBI-ProteinID: XP_024784262
Ensembl: ENSPPAG00000030297
Position
4:35685904..36025582
AA seq 1626 aa
MACPALGLEALQPLQPEPPPEPAFSEAQKWIEQVTGRSFGDKDFRTGLENGILLCELLNA
IKPGLVKKINRLPTPIAGLDNIILFLRGCKELGLKESQLFDPSDLQDTSNRVTVKSLDYS
RKLKNVLVTIYWLGKAANSCTSYSGTTLNLKEFEGLLAQMRKETDDIESPKRSIRDSGYI
DCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSRQTPSPDVVLRGSSDGRGSDSESDLPHR
KLPDVKKDDMSARRTSHGEPKSAVPFNQYLPNKSNQTAYVPAPLRKKKAEREEYRKSWST
ATSPLGGERPFSFPETIEEEGSEVGSAGEDNPVGQMNPGRKPSDGGCELPDGSGKEHPSS
DGAVVAPAPKSEEKDAAEIQKRKRLEQAGIKVMPAAQRFASQKQLSEEKEAIRDIVLRKE
NSFLTHQHGNDSEAEGEVVCRLPDLEKDDFAARRARMNQTKPMVPLNQLLYGPYPKKGAE
KSDGSKQLSKGISKKRSLEYKRNQGHTEEVKLIVTCNMRAQESEPVEGGLRKVPDLHKDD
LAQRRIQGRLAPHREPPSFITLSNITEADLETWERLKVSEKARDGDVQHICASEPSPEIK
AETAIRDDFANRKARASKKASSPRQKFVHFGPVTEIDQQKWKRLSIGKAGPREDEEEVIC
HGSKIQTDSVSPVSAATSSLKGHQIFNRQNDCRTMNSGRGDYCRRASWLAPVPESQEEWV
CSLGECPRGTEEVTSKQLPQDGKEEMESAPRDSERLSKAERSEDSSQPLLCPLASECEAS
GTEEKLEKMTAPAWSGSGLKGQRKLDDSRKDDMMARRTGMSLRHTGSNPNQFLPVPFAKQ
QDVEESSKGLPMKDQRYGPRTPVSDDAESTSMFDMRCEEEAAVQPHSRARQEQLQLINNQ
LREEDDKWQDDLARWKSRRRSVSQDLIKKEEERKKMEKLLAGEDGTSERRKSIKTYREIV
QEKERRERELHEAYKNARSQEEAEGILQQYIERFTISEAVLERLEMPKILERSHSTEPNL
SSFLNDPNPMKYLRQQSLPPPKFTATVETTIARASVLDTSMSAGSGSPSKTVTPKAVPML
TPKPYSQPKNSQDVLKTFKVDGKVSVNGETVHREEEKERECPTVAPAHSLTKSQMFEGVA
RVHGSPLELKQDNGSIEINIKKPNSVPQELAATTEKTEPNSQGDKNDGGKPRKGNIELAS
SEPQHFTTTVTRCSPTVAFVEFPSSPQLKNDVSEEKDQKKPENEMSGKVELVLSQKVVKP
KSPEPEATLTFPFLDKMPEANQLHLPNLNSQVDSPSSEKSPVTTPFKFWAWDPEEERRRQ
EKWQQEQERLLQERYQKEQDKLKEEWEKAQKEVEEEERRYYEEERKIIEDTVVPFTVSSS
SADQLSTSSSMTEGSGTMNKIDLGNCQDEKQDRRWKKSFQGDDSDLLLKTRESDRLEEKG
SLTEGALAHSGNPVSKGVHEDHQLDTEAGAPHCGTNPQLAQDPSQNQQTSNPTHSSEDVK
PKTLPLDKSINHQIESPSERRKKSPREHFQAGPFSPCSPTPPGQSPNRSISGKKLCSSCG
LPLGKGAAMIIETLNLYFHIQCFRCGICKGQLGDAVSGTDVRIRNGLLNCNDCYMRSRSA
GQPTTL
NT seq 4881 nt   +upstreamnt  +downstreamnt
atggcttgtcccgctctcggtttggaagctcttcagcccctgcagcccgagccgcccccc
gagcccgccttctccgaggcgcagaagtggattgagcaagtaactggcagaagttttggt
gataaagattttcggacaggtttagaaaatggaatcctcctctgcgagttgctgaatgct
ataaagccaggacttgttaaaaagatcaatagattgcctacccccattgcaggactggac
aatattatcttattcttgagaggttgtaaagagctcggccttaaagaatctcaacttttt
gacccgagtgacctccaggatacatccaacagagtaacagtcaagagccttgattatagt
aggaagctgaaaaatgtattagttaccatttactggctgggaaaagcagcaaacagctgc
acatcctacagcggaacgacactaaacctgaaggagtttgaaggattgttggctcagatg
cgaaaggagactgatgacattgaaagtcctaaacgcagtatccgagacagtggctacatc
gactgctgggattccgagcgcagcgactccctctctcctcctcgccacggcagagatgat
tccttcgacagcctggattcctttggctctcgctctcggcagacgccttcaccagatgta
gtcctcaggggaagcagcgatgggagaggaagcgactctgaatccgacttgcctcatcgg
aagctgccggatgtgaagaaggatgacatgtctgcacggcggacttcccatggtgagccg
aaatcagcagtgccttttaaccagtacctcccgaacaaaagcaatcagacggcctacgtc
cccgcgcctctgagaaagaagaaagcagagcgcgaggaataccgcaagagctggagtacc
gccacctccccgctgggtggggagaggcccttcagctttcctgaaacgatagaggaagag
gggagtgaagtggggtctgctggtgaagacaacccagttggccaaatgaatcctggtcgg
aagccttccgatggtgggtgtgaattacctgacggcagtggtaaggagcacccttcttca
gacggggctgtggtggcaccagctcccaagtctgaagaaaaagatgctgctgagatccaa
aagcgcaaaaggctagagcaagctggaatcaaggtcatgccagcagcacagcgctttgcc
agtcaaaaacaattaagtgaagagaaagaagctattcgtgatattgtccttcgcaaagaa
aactctttcctgacccaccaacatggcaacgattcagaggcagaaggtgaagttgtgtgt
cgactgcctgatcttgagaaggatgactttgctgcaaggagagcaaggatgaaccaaacc
aagccaatggtgccattaaatcaactcctctatggcccttatccaaagaaaggggcagag
aaatcagatggcagcaaacagctctcaaagggaatctcaaaaaaaagaagtctagaatat
aaaagaaaccagggccacacagaagaggtgaagttgatagtgacctgtaacatgagggct
caggaaagtgaacctgtggaaggaggactcaggaaggtgccagatcttcacaaggatgac
ctggcccagcggagaattcagggcaggcttgcccctcaccgcgagcccccgagcttcatt
acgctctccaacataacagaagctgacttggagacgtgggagagactcaaagtgtcagaa
aaggcgagggatggagatgttcagcacatctgtgcttctgagccttccccagaaattaaa
gcagaaactgccattcgtgatgactttgccaaccgcaaagcaagggcctctaagaaagct
tccagccccaggcaaaagtttgtgcactttgggccagtgacggagatagatcagcagaaa
tggaagcggcttagcattggcaaggctgggcctagagaggatgaagaagaagtcatctgt
catggcagcaagattcaaacggactctgtgtctcctgtctcagcggccacttccagctta
aagggccaccaaatatttaatcgacaaaatgactgcagaacaatgaattctggccgaggt
gactattgcagaagggcctcgtggctggctcctgtgccggagtctcaggaagagtgggtc
tgcagtttgggcgagtgcccgagggggacagaggaagttacatccaaacagctgccacag
gatggcaaagaagaaatggaaagcgctccaagagattctgagaggctgtcaaaggcagaa
agatcagaggacagcagccagccactgctgtgtcctctggcctctgagtgtgaggcttca
gggacagaagagaagttggagaagatgacagctcctgcctggagtggcagtggactgaaa
ggccagcgaaagttggatgattcacgaaaagatgacatgatggccaggagaactgggatg
tcccttagacacactggatccaacccaaaccagttccttccagttccatttgcaaagcaa
caggatgtggaagaatcttctaaaggtctacccatgaaagatcagagatacggtccgaga
actcctgtgtctgatgacgcagagagcaccagcatgtttgacatgcggtgtgaggaggag
gccgcggtgcagccgcacagcagggcccgccaggagcagctgcagctgataaataaccag
ctgagggaagaggacgacaaatggcaagatgacctggctcgttggaagagtcgtagaaga
agtgtttctcaggacttaatcaagaaagaggaagaaaggaaaaaaatggagaagttactg
gctggagaagatgggacaagtgaacgaaggaaaagcatcaaaacctacagagaaattgtt
caagaaaaagagcggagagagagagagttgcatgaagcatataagaacgctcggtcccag
gaggaggcagaggggatccttcaacagtacattgagaggttcaccatcagtgaggctgtt
cttgaacgcttggagatgccaaaaattctggaaagaagccattcaacagagccaaattta
tcctccttcctgaatgaccccaatcccatgaaatacctgcggcaacagtcactgcctcca
cccaaattcactgccactgttgaaaccaccattgctcgtgccagtgttctggataccagc
atgtcagcaggcagtgggtctccaagcaaaactgtcactcccaaagcagtgcctatgctg
acacccaagccttactcccagcccaaaaattctcaagatgttctgaagacctttaaggta
gatgggaaagtcagtgtgaatggagagacggttcatagagaggaggagaaggaaagagag
tgtcccacggtggcacctgcccactccttaaccaaatcccagatgtttgaaggtgtggcc
agagtgcacgggtctccactggagctgaaacaagacaacggtagcatcgagatcaacata
aagaagccaaactctgttccccaagagctcgcagcaaccactgagaaaacggaaccgaat
agtcaaggggacaagaatgatggtggaaaaccaagaaaagggaatatagaacttgcctca
tcagaaccacagcattttacaacaactgtgactcgatgcagcccgaccgtggcctttgtg
gaatttccctccagcccccagctgaagaatgatgtgtcggaagaaaaagaccagaagaaa
ccagaaaatgaaatgagtggaaaggtggagttggtgctgtcacaaaaggtggtaaagcca
aaatctccagaacccgaagcaacgctgacatttccatttctggacaaaatgcctgaagcc
aaccaactacatttgccaaatctcaattctcaagtggattctccaagcagtgagaagtca
cctgttacaacaccttttaagttctgggcatgggacccagaagaggagcgcaggcgacag
gaaaaatggcaacaggaacaggaacgtttgctccaggagagataccagaaggagcaggac
aagctgaaagaagagtgggaaaaggcccaaaaggaggtggaagaggaagaacgcagatac
tatgaggaggagcgtaagataattgaagacactgtggttccatttactgtttcttcaagt
tccgctgaccagctgtctacctcttcctccatgactgaaggcagtgggacaatgaataag
atagacctgggaaactgtcaagatgaaaaacaagacagaagatggaagaaatcattccag
ggagatgacagtgacttattgctgaagactagggaaagtgatcgactggaggagaagggc
agcctaactgaaggggccttggctcattctgggaaccctgtatcaaaaggagtccatgaa
gaccatcagctggataccgaggctggggccccacactgtggaacaaacccacagcttgct
caggatccatcccagaatcagcagacatcaaatccaacgcacagttcagaagatgtgaag
ccaaaaaccctcccactggataaaagcattaaccatcagatcgagtctcccagtgaaagg
cggaagaaaagtccccgagagcacttccaggctgggcctttctctccctgttctcccacc
cctcccggtcagtcaccaaacaggtctataagtggaaagaagctgtgctcttcctgtggg
cttcctttgggtaaaggagctgcaatgatcatcgagaccctcaatctctattttcacatc
caatgtttcaggtgtggaatttgtaaaggccagcttggagatgcagtgagtgggacggat
gttaggattcgaaatggtctcctgaactgtaatgattgctacatgcgatccagaagtgcc
gggcagcctacaacattgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (12)   
   RefSeq(pep) (12)   
DNA sequence (12)   
   RefSeq(nuc) (12)   
Protein domain (3)   
   Pfam (3)   
All databases (41)   

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