KEGG   Pan paniscus (bonobo): 100991609
Entry
100991609         CDS       T02283                                 
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X3
  KO
K14308  nuclear pore complex protein Nup54
Organism
pps  Pan paniscus (bonobo)
Pathway
pps03013  Nucleocytoplasmic transport
pps05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:pps00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100991609 (NUP54)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100991609 (NUP54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pps03019]
    100991609 (NUP54)
Messenger RNA biogenesis [BR:pps03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100991609 (NUP54)
SSDB
Motif
Pfam: Nup54 Nup54_C XhlA
Other DBs
NCBI-GeneID: 100991609
NCBI-ProteinID: XP_003832340
Ensembl: ENSPPAG00000040336
UniProt: A0A2R9BZV1
Position
4:48057553..48091471
AA seq 508 aa
MAFNFGAPSGTSGTAAATAAPAGGFGGFGTTSTTAGSAFSFSAPTNTGTTGLFGGTQNKG
FGFGTGFGTTTGTSTGLGTGLGTGLGFGGFNTQQQQQQTTLGGLFSQPTQAPTQSNQLIN
TASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYS
CMPSNKDEDGLVVLVFNKKETEIRSQQQQLVESLHKVLGGNQTLTVNVEGTKTLPDDQTE
VVIYVVERSPNGTSRRVPATTLYAHFEQANIKTQLQQLGVTLSMTRTELSPAQIKQLLQN
PPAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDIS
ELQKNQTTSVAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQG
ELNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYYIDADLLREIKQHLKQQQEGLSHLIS
IIKDDLEDIKLVEHGLNETIHIRGGVFS
NT seq 1527 nt   +upstreamnt  +downstreamnt
atggccttcaattttggggctccctctggcacctccggtaccgctgcagccaccgcggcc
cccgcgggtgggtttggaggatttgggacaacatctacaactgcaggttctgcgttcagc
ttttctgccccaactaacacaggcactactggactctttggtggtactcagaacaaaggt
tttggatttggtactggttttggcacaacaacgggaactagtactggtttaggtactggt
ttgggaactggactgggatttggaggatttaatacacaacagcagcagcagcaaactaca
ttaggtggtctcttcagtcagcctacacaagctcctacccagtccaaccagctgataaat
actgcgagtgctctttctgctccaacgctgttgggagatgagagagatgctattttggca
aaatggaatcaactgcaggccttttggggaacaggaaaagggtatttcaacaataatatt
ccgccagtggaattcacacaagaaaatcccttttgccgatttaaggcagtaggttatagt
tgcatgcccagtaataaagatgaagatgggctagtggttttagttttcaacaaaaaagaa
acagagattcgaagccaacaacaacagttggtagaatcattgcataaagttttgggagga
aaccagacccttactgtaaatgtagagggcactaaaacattgccagatgatcagacagaa
gttgttatttatgttgttgagcgttcgccaaatggtacttcaagaagagttccagctaca
acgctatatgcccattttgaacaagccaatataaaaacacaattgcagcaacttggtgta
accctttctatgactagaacagaactttctcctgcacagatcaaacagcttttacagaat
cctcctgctggtgttgatcctattatctgggaacaggccaaggtagataaccctgattct
gaaaagttaattcctgtaccaatggtgggttttaaggaacttctccgaagactgaaggtt
caagatcagatgactaagcagcatcaaaccagattagatatcatatctgaagatattagt
gagctacaaaagaatcaaactacatctgtagccaaaattgcacaatacaagaggaaactc
atggatctttcccatagaactttacaggtcctaatcaaacaggaaattcaaaggaagagt
ggttatgccattcaggctgatgaagagcagttgcgagttcagctggatacgattcagggt
gaactaaatgcacctactcagttcaagggccgactaaatgaattgatgtctcaaatcagg
atgcagaatcattttggagcagtcagatctgaagaaaggtattacatagatgcagatctg
ttacgagaaatcaagcagcatttgaaacaacaacaggaaggccttagccatttgattagc
atcattaaagatgatctagaagatataaagctggtcgaacatggattgaatgaaaccatc
cacatcagaggtggtgtctttagttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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