KEGG   Rickettsia conorii: RC0212
Entry
RC0212            CDS       T00061                                 
Symbol
hupA
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
rco  Rickettsia conorii
Brite
KEGG Orthology (KO) [BR:rco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rco03032]
    RC0212 (hupA)
   03036 Chromosome and associated proteins [BR:rco03036]
    RC0212 (hupA)
   03400 DNA repair and recombination proteins [BR:rco03400]
    RC0212 (hupA)
DNA replication proteins [BR:rco03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    RC0212 (hupA)
Chromosome and associated proteins [BR:rco03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    RC0212 (hupA)
DNA repair and recombination proteins [BR:rco03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      RC0212 (hupA)
SSDB
Motif
Pfam: Bac_DNA_binding Phage_int_SAM_4 HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: AAL02750
UniProt: Q92J57
Position
222017..222436
AA seq 139 aa
MMYIIASCIYCFIKKHQYILTYQRRIDFIMSTHNTKEPKKMNKTEFIAFMTDHGHNHKHA
SHKTLTKAEAEKALNLVLDSVISAIKSHHNINITGFGSFEIHHRKAREGRNPKTGAKMKI
DAYNQPTFRAGRKMKEACN
NT seq 420 nt   +upstreamnt  +downstreamnt
ttgatgtatattattgccagttgtatatattgttttataaaaaaacatcaatacatatta
acctatcaaaggagaattgattttattatgagtacacataacacaaaagaaccaaaaaaa
atgaataaaaccgaatttatagcatttatgaccgaccatggtcataatcataaacatgct
tcacataaaacattaacaaaagctgaagccgagaaagcacttaatttagttcttgatagt
gtgattagtgctataaagagccaccataatattaatataacaggtttcggttcatttgaa
atacatcatagaaaagcacgtgagggtcgtaacccaaaaaccggagcaaaaatgaaaata
gatgcttacaatcaacctacttttagagccggaagaaaaatgaaagaagcttgtaattaa

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