KEGG   Sinorhizobium fredii NGR234: NGR_c21040
Entry
NGR_c21040        CDS       T00888                                 
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
rhi  Sinorhizobium fredii NGR234
Pathway
rhi00470  D-Amino acid metabolism
rhi00550  Peptidoglycan biosynthesis
rhi01100  Metabolic pathways
rhi01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:rhi00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    NGR_c21040 (ddlB)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    NGR_c21040 (ddlB)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    NGR_c21040 (ddlB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rhi01011]
    NGR_c21040 (ddlB)
Enzymes [BR:rhi01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     NGR_c21040 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:rhi01011]
 Precursor biosynthesis
  Amino acid ligase
   NGR_c21040 (ddlB)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 CPSase_L_D2 ATP-grasp_3 GARS_A ATPgrasp_ST
Other DBs
NCBI-ProteinID: ACP25867
UniProt: C3MEM6
Position
complement(2165542..2166462)
AA seq 306 aa
MSGKHVAVLMGGFSSERPVSLSSGAACADALEAEGYRVSRVDVGRDVAAVLADLRPDIVF
NALHGPFGEDGTIQGILEYLEIPYTHSGVLASALAMDKAQAKHVAKAAGIPVADALIMDR
REFGNAHPMKPPYVVKPVREGSSFGVVIVKEDQSHPPQVITSSEWRYGDRVMVERYIAGR
ELTCGVMGDVALGVTEIIPQGHAFYDYDSKYVKGGSAHVIPAQISPNIYQKIQSLAVKAH
QAIGCRGVSRSDFRFDDRGEGELIWLEINTQPGMTPTSLVPEMAQHAGLQFGEFLRWMVE
DASCLR
NT seq 921 nt   +upstreamnt  +downstreamnt
atgagcggcaagcatgttgctgtcctgatgggcggattttcctcggagcggccggtgagc
ctgtcttccggggcagcttgcgcggatgccttggaggccgagggctatcgcgtcagccgg
gtcgatgtcggccgggatgtggctgccgtgctcgccgatttgcgtccggatattgtcttc
aacgccctgcacgggccgttcggcgaggacgggacgatccagggcattctggaatatttg
gagattccctacacccattccggcgtgctcgcctcggcgcttgcgatggacaaggcgcag
gccaagcacgttgccaaggcggctggcatcccggttgccgacgcgttgatcatggatcgc
cgcgagttcggcaatgcccatccgatgaagccgccttatgtcgtgaagccggtccgcgag
ggatcgagcttcggcgtcgtcatcgtcaaggaagaccagtcgcatccgccgcaggtcatt
acctccagcgaatggcgctacggcgaccgcgtcatggtcgagcgctacattgccggccgc
gaactcacctgtggcgtcatgggtgacgtggcgctcggcgtcaccgagatcatcccgcag
gggcatgccttctacgactatgattccaaatacgtaaaaggtggttcggcgcacgtcatt
ccggcgcagatttcaccaaatatttaccaaaaaatacaatcattggcggtgaaggcgcat
caggcgatcggttgccgcggcgtcagtcgatccgacttccgtttcgatgatcgtggcgag
ggcgagttgatctggctggagatcaatacgcagcccggcatgaccccgacctccctggtg
cccgaaatggcgcagcatgcgggccttcagtttggtgagtttctaagatggatggtggag
gacgcatcgtgcttgcgttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (27)   

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