KEGG   Rattus norvegicus (rat): 100190936
Entry
100190936         CDS       T01003                                 
Symbol
Rnf123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123
  KO
K12169  Kip1 ubiquitination-promoting complex protein 1 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    100190936 (Rnf123)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100190936 (Rnf123)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100190936 (Rnf123)
  Multi subunit Ring-finger type E3
   KPC complex
    100190936 (Rnf123)
SSDB
Motif
Pfam: SPRY zf-C3HC4_3 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-C3HC4_4 zf-RING_UBOX
Other DBs
NCBI-GeneID: 100190936
NCBI-ProteinID: NP_001178509
RGD: 2301394
Ensembl: ENSRNOG00000033378
Position
8:complement(117618776..117646400)
AA seq 1312 aa
MTSKGAAMSFSRKSYRLTSDAEKSRVTGIVQEKLLSDYLYRIFSSPDHGTPAATSRKPLN
FHNLPEHVDQLLQVDDEESQGQVEGRLGPSTVVLDHTGGFEGLLLVDDDLLGVIGHSNFG
TIRSSTCVYKGKWVYEVLISSQGLMQIGWCTINCRFNQEEGVGDTHNSYAYDGNRVRKWN
VTTTNYGKAWAAGDIVSCLIDLDDGTLSFCLNGVSLGTAFENLSRGLGMAYFPAISLSFK
ESVAFNFGSRPLRYPVAGFRPLQDPPFADLVRAQRLLGCFQTVLSVELDPVEGRLVEKES
SEWQLHGQPTVLLTLAHIFHHFAPLLRKVYLVEAVLMSFLLGIVEKGTPEQAQSVVHQIL
DLLWLFMEDYEVQDCLKQLMMSLLRLYRFSPIVPDLGLQIHYLRLTMAVLRHEKSRKFLL
SNVLFDMLRSVVFFYIKSPLRVEEAGLKELIPTTWWPHRSSREGRDGQEAKEETTEERQR
RRAYERGCQRLKKRIEVVEELQVQILKLLLDNKDDNGGEASRYIFLTKFRKFLQENASGR
GNTPVLCPPEYMVCFLHRLVSALRFYWDEYKASNPRASFSDEAYIPPQIFYNGKVDYFDL
QRLGGLLSHLRKTLKDDLASKANIVIDPLELQAATMDDLDEDEEPAPTAAQRPVQALAIG
GALPLPRPGWLSSPTLGRANRFLSTAAVSLMTPRRLLSTMEKVKVRSLNVEQRTREDIEG
SHWNEGLLLGRPPEEPERPLTENSLLEVLDGTVMMYSLSVHQQLGKMVGVSDDVNEYAMA
LRDTEDKLRRCPKRRKDILAELTKSQKVFSEKLDHLSRRLAWVHATVYSQEKMLDIYWLL
RVCLQTIEHGDRTGSLFAFMPEFYLSVAINSYSALKNYFGPVHSMEELPGYEETLTRLAA
ILAKHFADPRIVGTDIRDSLMQALASYVCYPHSLRAVERIPEEQRIAMVRNLLAPYEQRP
WAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDANLPSLQKPCPSTLLQQHMADLLRQG
SDVAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDLSVSLL
RVLEMTITLVPEIFLDWSRPTSEMLLRRLAQLLNQVLNRVTAERNLFDRVVTLRLPGLES
VDHYPILVAVTGILVRLLAHGPSSETEQATSVLLADPCFQLRSIRYLLGQPEPLAPGSAL
PAPDRKRFSLQSYADYISAEELAQVERMLAHLTAASAQAAAASLPTNEEDLCPICYAHPI
SAVFQPCGHKSCKACINQHLMNNKDCFFCKATIVSVEDWDKAASTSATSSAA
NT seq 3939 nt   +upstreamnt  +downstreamnt
atgacgtccaagggggctgccatgtctttctcccgaaagagctataggttgacctcagat
gctgagaagtccagggtcacaggcattgtgcaagagaagctactgagcgactacctgtac
cggatcttttcctctcctgaccatgggacccctgcagccaccagcaggaaaccgctgaac
ttccataacctgccagagcatgtggaccagctgctgcaggtggacgacgaagagagccag
ggacaagttgaaggccgacttggcccatctactgtggtcctagaccacacaggaggcttt
gaggggcttctccttgtggacgatgacctcctgggggtgattggacacagcaactttggc
actatccgttcttccacatgtgtgtacaaagggaaatgggtctacgaggtgctcatctcc
tcccaggggctcatgcagatcggctggtgtaccatcaactgccgctttaatcaggaggaa
ggggttggagatacacacaactcctatgcctatgacggcaaccgagtgcgcaagtggaac
gtgacgacgacgaactacggcaaggcatgggcagcgggggacattgtgagctgcctcatt
gatctggatgatggtactctgtccttttgcctgaatggtgtgtcactgggcactgccttt
gagaacctttccaggggcctaggaatggcgtacttcccagccatcagcctgtcgttcaag
gagtctgtggcattcaactttggcagccgacctttgcgctacccagttgcgggcttccgg
cccctgcaggaccctccctttgctgacctggtccgggcacagaggttgctgggctgcttc
cagacagtgctaagtgtagagctggaccctgtggaagggcggttggtggagaaggagagc
tctgagtggcagctgcacgggcagcccactgtcctcctcacgctggcccacatcttccat
cactttgcaccactgctgcgcaaggtgtacctagtggaggctgtgctcatgagcttcctg
ctgggcattgtggagaagggcacccctgagcaggcccagtccgtggtacaccagatcttg
gacctcttgtggctcttcatggaggactatgaagttcaggattgcctcaagcagttgatg
atgtctctgctacgtctctaccgattctcgcccattgttccggacctgggtctacagatc
cactacctgcgcctcactatggccgtcctgagacatgagaagtcccgcaagttcctgctt
agcaatgtcctttttgacatgctccggtccgtggtcttcttttacattaagagtcccctg
cgtgtggaggaagctggcctgaaggaactcatccccaccacctggtggccccatcgctcc
agcagggagggcagagacggtcaggaagcaaaggaggagaccacggaagagcggcagcgg
aggagagcttacgagcgtggctgccaaagactcaagaaacgcattgaagtggtggaagaa
ctgcaggtccagatcctgaagctgctgttggacaacaaagatgacaatgggggtgaagct
tctcggtacatctttctgacaaaattccgaaagttcctgcaggagaatgccagtggccgg
gggaacacacccgtgctctgcccccctgagtacatggtctgtttcctacaccggctggtg
tctgccttgcgtttctattgggatgaatacaaagcttccaacccccgtgcttcctttagc
gatgaggcttatatcccgcctcagatcttctataatggcaaggtggactacttcgacctt
cagcgcctcgggggcctcctctcacaccttcgaaagacccttaaagatgaccttgcttcc
aaagccaatatcgtgattgatcccctggagctccaggcagccaccatggatgacctggat
gaggatgaagagccggcccccacagcagcccagcgtcccgtgcaagcactggccatagga
ggggccctgcccctgccccggcctggctggctaagttctccaaccctgggccgagccaac
cgtttcctcagcacagcagccgtgagcctcatgaccccacggcggcttctgagcaccatg
gagaaagtaaaagttcgctccctgaatgtggaacagaggacccgtgaggacattgagggc
agccactggaatgagggtctgctgttggggaggccccctgaagagcctgagcggccgctt
acggaaaactcgctgttggaagttctggatggcacagtcatgatgtacagtctgagcgtt
caccagcagctgggcaagatggtgggtgtgtctgatgatgtcaacgagtatgcaatggcc
ctgagagacaccgaggacaagctacgtcggtgccctaagaggaggaaggatatccttgca
gagttgaccaagagccagaaggttttctcagaaaagctggaccacctgagccgcaggctt
gcctgggtccatgccaccgtctactcacaggagaaaatgctggatatctactggttactg
cgtgtctgcctacagaccattgagcatggggatcgcacaggatctctctttgccttcatg
cccgagttttacctaagtgtggctatcaacagctacagtgcccttaagaattattttggc
cctgtgcacagcatggaggagctcccaggctatgaagagaccctgacccgcttagctgcc
atcctcgccaaacactttgctgaccctcgaatagtaggcactgacattcgagactcgctg
atgcaggccctggccagttacgtgtgttacccacattccctgcgggccgtggaacggatc
cccgaggagcagcgcatcgccatggtgaggaaccttttggccccctatgagcaacgaccc
tgggcccagaccaactggatcctggtgcggctttggaggggctgtggttttgggtaccgc
tacacacggctgccacatctgctgaaaaccaagccagaggatgctaatttgccaagcctc
caaaagccctgcccttcaaccttgctacagcagcacatggcagaccttctgcgacaaggt
tctgatgtggcaccaagcttcctcaacagcgtccttaaccagctcaactgggccttctct
gagttcatcggcatgatccaggagattcaacaggctgctgaacgcctagagcgaaacttt
gtggacagccggcagctcaaggtctgtgccacctgcttcgacctgtcagtcagcttgctg
cgcgtcttggaaatgaccatcacactggtccctgaaatcttccttgactggtcccgccct
acctctgagatgctgcttcggcgtcttgcacagctgctgaaccaggtgctgaaccgggtg
acagctgagaggaacctgtttgaccgtgtagtcacgctgcggctacctgggctggagagt
gtggaccactaccctatcttggtggcagtgaccggcatcctggtacgcctcctggcacac
ggtccatcctcagagacagagcaagccacatctgtgctcctggctgatccctgcttccag
ctccgctctatacgctatctcctggggcagccagagcccctagcacctggctccgccttg
cctgcccctgaccggaaacgcttctctctacagagctatgcagattacatcagtgctgag
gagctggcccaggtggaacggatgctggctcacctgaccgcggcatcggcccaggcagca
gctgcctccctgcccaccaatgaggaggacctctgcccaatctgctatgcccaccccatc
tctgctgtgttccagccttgtggtcacaaatcctgcaaagcctgcatcaaccagcatctg
atgaacaacaaggactgcttcttctgcaaagccaccattgtatctgtagaggactgggac
aaggcagccagcacaagtgccacatcctcagctgcctag

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