KEGG   Rattus norvegicus (rat): 100359512
Entry
100359512         CDS       T01003                                 
Symbol
Vti1b
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
  KO
K08493  vesicle transport through interaction with t-SNAREs 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    100359512 (Vti1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    100359512 (Vti1b)
Membrane trafficking [BR:rno04131]
 SNARE
  SNAP-25[N] (Qb)
   Vti1
    100359512 (Vti1b)
SSDB
Motif
Pfam: V-SNARE_C V-SNARE Sec20 Laminin_II YqjK DUF745 OmpH Snapin_Pallidin KxDL Exonuc_VII_L
Other DBs
NCBI-GeneID: 100359512
NCBI-ProteinID: NP_001364123
RGD: 2323682
Ensembl: ENSRNOG00000060436
Position
6:complement(103694342..103709544)
AA seq 201 aa
MATSAASSEHFEKLHEIFRGLLEDLQGVPERLLGTAGTEEKKKLVRDFDEKQQEANETLA
EMEEELRYAPLTFRNSMMSKLRNYRKDLAKLHREVRSTPLTATPGGRGDLKFGTYTLENE
HLNRLQSQRALLLQGTESLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQLERTKSR
LVNTNENLSKSRKILRSMSRK
NT seq 606 nt   +upstreamnt  +downstreamnt
atggccacttccgccgcctcctccgagcatttcgagaagctgcacgagatcttccgcggc
ctccttgaagatctacaaggggtgccggagcggctgctgggaaccgcggggaccgaggag
aagaagaagctggtcagagactttgatgaaaagcagcaggaagcaaatgaaacgttggca
gagatggaggaagaactacgatatgcacccctgacttttcgtaactccatgatgtctaag
cttcgaaactaccggaaggaccttgctaaactccaccgtgaggtgagaagtacacctttg
acagccacacctggaggccgaggagacctgaagtttggcacatataccttagagaatgag
catttgaatcggctgcagtctcaaagagcattacttctgcaaggcactgaaagcctgaac
cgagccacccaaagcattgagcgttctcatcggattgccgcagaaactgaccaaattggt
tcagaaatcatagaagagttgggggagcaacgagaccagttggaacgtaccaagagtaga
ctggtaaacacaaatgaaaacttaagcaaaagccgaaagattcttcgctctatgtccaga
aagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (10)   
   Pfam (10)   
All databases (30)   

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