KEGG   Rattus norvegicus (rat): 100360302
Entry
100360302         CDS       T01003                                 
Symbol
Sec16a
Name
(RefSeq) protein transport protein Sec16A
  KO
K20353  COPII coat assembly protein SEC16
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    100360302 (Sec16a)
Membrane trafficking [BR:rno04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    100360302 (Sec16a)
SSDB
Motif
Pfam: Sec16_C Sec16
Other DBs
NCBI-GeneID: 100360302
NCBI-ProteinID: NP_001263346
RGD: 2322350
Ensembl: ENSRNOG00000019122
UniProt: D3ZN76
Position
3:complement(29627779..29662925)
AA seq 2346 aa
MQPPPQAVPSGVAGPPPAGNPRSSFWANSPYRKPANNNAPVAPITRPLQPVTDPFAFNRQ
TLQNTPVGSSSKSSPPNLPGPALPVFSQWPGLPVPPTNAGDSSTGLHEPLPGTLSQPRAD
PSLFPPASTPSSLPGLEVNRSAEVDSSSGPEVQMLPHPPHYIPGVGPEQPHGGHLNDSGA
GPDQSMNRHAPHDGAVAHAASPFFPQPQMPGQWGPVHGGPPPSYHHHSPCLEGPVQDMGP
QAASLPHFPSPSSLHEGPGHESRVPQTFTPASLASGEGNEIVHQQSKNYPSSSFPPKHSF
EQNSRVGNMWASAEFRQNPGVNKEHLLDPAHVNPFTQGNSPENQVHHPPVAATNHALQEA
ASGALSMFFQGEETENEENLSSEKAGLDDRLDSGSFSSTSRLGHPPLPGAGGVYQAAQEG
DVQPYFSQFVGIRHDKQTTMTPANDAWGDIPGAGTHCASGPQCENVENLEFVQNQEVLPR
ETVNVDPFSPSDQFRYGPLPGPAASRPVTSGLTRGGGLNLEAPDMPLHPTRPDSVSSSYS
NHSHRSPPGSARPQELVGTFIQQEVGKLEDDTSGSFFKQIDSSPVGGETDEMTRSQNYCS
SLSQPSTPSPPKPTGVFQTSANSSFEPVKSHLVGVKPVEADRANMVVEVRGTQNCQKHGA
AVLPPDATPGNLEQPPDNMETLCAPQACPLPLSTTGEAGQLVSHTAGPPLDTVRPMPDKR
SSARAQGPVKCESPATTLWAQNELPDFGGNVLLAPAAPALYVPVKPKPSEVVHHPEKGMS
GQQSWKSGSVPPLQNQDPPGASENLENPPKVGEEEALPLQASSGYASLLSSPPTESLHNQ
PVLIAQPDQSYNLAQPINFSVSLPNPNEKNQCWGDAVVGEKSMVSTRALGADHEEHAALS
AIPASTVTGSSLPNSVTQNCAPRGSGSSEMIASQPASWLVQQLSPQIPQSQHPNAEKGPS
EFVNSPANGSVMLAPPANSAVIPNSNKGYHSRNPEEAIGALDFTLSRTLENPVRMCSPSH
SNSPASQQPLANHPRQSGPGLHNQDHFYQQVTKDAQDHRSLERGQSELVPPPPQNSPQQV
PQAACPEPSNPESPPTQGQSEGLVQPSASPAPVNTGQQPQPPQSSSASVTSTNSNQAAVR
SEQPWLHPPPTTFGPAPQDLASYYYYRPPYEAYQSPYPSPYPSDPGAASLYYQDIYGLYE
PRYRPYDSSASAYAENHRYSEPERPSSRASHYSDQLTPRQGYPEGYYNSKSGWSSHSDYY
ANYYSGQYDYGDPGRWDRYYGSRFRDPRTWDRRYWYDSDHDPYRKDNYAYSDRPEKCDDH
WRYDPRFTGSFDDDTELHRDPYGEEVDRRSIHSEHSARSLRSTHSLPSRRSSLSSHSHQS
QIYRSHHVTGGSFEAPHAPGSFHGDYAYGTYASNFSGAHGFPEYSYPADTSWPAAEQVPS
RPTSPEKFTVPHVCARFGPGGQLLKVIPNLPSEGQPALVEIHSLETLLQHTPEQEEMRSF
PGPLGKDDTHKVDVINFAQNKATKCLQNESLIDKESASLLWNFIILLCRQNGTVVGTDIA
ELLLRDHRTVWLPGKSPNEANLIDFTNEAVEQVEEEESGEAQLSFLTDSQTVTSSVLEKE
TERFRELLLYGRKKDALESAMKNGLWGHALLLASKMDSRTHARVMTRFANSLPINDPLQT
VYQLMSGRMPAASTCCGDEKWGDWRPHLAMVLSNLNNNMDVESRTMATMGDTLASKGLLD
AAHFCYLMAQVGFGVYTKKTTKLVLIGSNHSLPFLKFATNEAIQRTEAYEYAQSLGAHTC
SLPNFQVFKFIYLCRLAEMGLATQAFHYCEVIAKSVLTQPTAYSPVLISQLIQMASQLRL
FDPQLKEKPEEESFVEPAWLVQLQHVERQIQEGTVLWNQDGTEPQQCHITSGSEVEQPDG
PGLNQQAGPRADNPLLMPSTEPLVHSVQLLPTAPQTLPDGQPAHLARVPMFPVPMSRPPL
ELSAAYGPPGSVLGFPESSRSDPAVLHPGQALPPATPGLQESGPPLQEARSPDPEMVPQG
SPVRHSPPEPREEEFGKNVADLGSSRTAQDSETSPVWDLGSSSLTRAPSLTPDSEGKKPA
QAVKKEPKEPKKTESWFSRWLPGKKRTEAYLPDDKNKSIVWDEKKNQWVNLNEPEEEKKA
PPPPPTSFPRVPQAAPTGPAGPPMASVNVFSRKAGGSRARYVDVLNPSGTQRSEPALAPA
DFFAPLAPLPIPSNLFVPNPDAEESQPADGTGCRGQAPAGTQSKAEPTLEAKVVSSTVSA
PGPELSPSKPADGSQGGEAPGDHCPAGATPGGSVPFYNPAQLVQASVTSGTSRPGRIGQR
KYAALN
NT seq 7041 nt   +upstreamnt  +downstreamnt
atgcagccaccacctcaggcagtcccgtctggtgtggctggcccacccccagctgggaat
cctcgaagctcgttctgggccaacagcccttacaggaagccagccaataataatgcacca
gtggctcccataacacgcccactgcagccagtaacggatccgtttgcttttaacagacag
actcttcaaaacacaccagtgggcagttcatccaaaagcagcccacctaatttgcctggc
ccagccctccctgttttttctcagtggcctggtttgcctgtgcctcccacaaatgctggg
gatagctccacaggacttcatgagcctctgccaggaactctgtcacagcctagagcagac
cccagtctatttcctcctgcatctaccccttcttcattgcctgggctggaggtgaacagg
agtgctgaggttgattccagctcaggacctgaagtccagatgctgccacatccacctcac
tacattccaggagtgggtcctgagcagcctcacggaggccatctgaatgacagtggggct
gggcctgaccaatccatgaataggcacgccccacatgatggtgctgtggcccatgcagca
tctcctttcttccctcagccccagatgccaggtcagtgggggcctgtgcatggaggccct
ccgccctcctatcatcatcactcaccctgcctggagggccctgttcaggacatggggccc
caggctgccagcttgccccatttcccctctccatctagtctacacgagggacctggccat
gagtcccgtgtcccacaaacgtttactccagcatccttggccagtggtgaaggaaatgag
atagtccaccagcaaagtaaaaattacccatcgagtagcttcccccctaaacacagtttt
gagcagaattccagagttgggaatatgtgggcaagcgcggagttcaggcagaatccagga
gttaataaagagcatctgctagaccctgcccatgtgaatcccttcactcagggaaacagc
cctgagaaccaggtgcaccatcccccagtggccgcaactaaccatgccctgcaagaagca
gcctccggagcgctctcaatgttttttcaaggggaggagacagagaacgaggaaaatctc
tcatctgaaaaagcaggccttgatgacagattagactcgggtagcttctcttctacctcc
agactgggccatccaccactccctggagctggtggtgtctaccaggccgctcaggaagga
gatgtgcaaccttatttttctcagtttgtgggcatccgtcatgacaaacagaccactatg
actcctgctaatgatgcgtggggtgatattccgggtgctgggacccactgtgctagtggg
ccacagtgtgagaatgtagagaacctagaatttgttcagaatcaagaagttttgccacgt
gagaccgtgaatgtggatcccttttccccgagtgatcagtttcgatatgggccccttcct
gggccagctgcctccaggcctgttacttcgggcctcactagaggaggagggctaaatctt
gaggcccctgacatgccactgcaccctacacgacctgacagtgtgtcatccagctacagc
aaccatagtcacagaagtcctcctgggtcagccagaccccaagaattggtgggcacattc
attcagcaagaagttggaaaactcgaagatgatacgtcagggagtttttttaagcaaatt
gattcttctccggttggaggtgaaacagatgagatgaccaggagtcaaaattactgcagc
agcctgtcccagccttcaactccaagccctccaaaacctacgggagtcttccagacaagt
gcaaatagttcttttgagccagtaaaatcccacttggttggagtgaaaccagttgaagca
gatcgtgccaacatggtggttgaagtgagagggacccagaactgccagaagcacggggcc
gctgttctaccacctgatgccaccccaggaaacctggaacagccaccagacaacatggag
accctgtgtgcacctcaggcctgccctttgcctcttagcaccactggagaggctgggcaa
ctggtttcacacacagcagggccacccttggatactgtgcgccccatgcctgacaagagg
tcctcagccagggcccaggggcctgtgaaatgtgagagcccagccacaactctgtgggca
caaaacgaactgccagattttgggggcaatgtccttctagcccctgctgcccctgcactt
tatgttcctgtaaaaccaaaaccttcagaggttgttcatcatccagaaaagggcatgtct
ggacagcagtcatggaaatcagggtctgtgccccctttgcagaaccaagaccctcctggt
gcttctgagaaccttgagaaccctcccaaggtaggagaagaggaggcccttccattgcag
gcaagttctggttatgcgagtttgctgtcctcaccacccactgaatctttacacaatcaa
cctgtcctgattgcccagcctgatcaaagctataatttggctcagcccattaatttttct
gtgtccttaccgaatcctaatgagaagaatcagtgctggggagatgctgtggtgggggag
aaatccatggtgagcacccgggctcttggtgctgaccatgaagaacatgctgccttgtct
gcaattccagccagtactgtcactggctcgtctttgcctaacagtgtcacccagaactgt
gcccctcgaggttctgggtcttctgaaatgattgctagccagcctgccagttggttggtt
caacagctgtcccctcagattcctcaaagtcagcaccccaatgcagagaagggtccttct
gagtttgttaatagccctgctaatggaagtgtgatgctagctccacctgcaaacagtgct
gtgatacctaacagtaataaggggtatcactctagaaacccggaagaagccatcggtgcc
ctagacttcacattgagtagaactttggaaaatcctgtgagaatgtgtagcccatctcat
tcaaacagcccagcttctcagcagcctcttgccaatcatcccagacaatctgggcctggg
ctgcataaccaggatcatttctaccagcaggtaacaaaagatgctcaggatcaccgtagc
ctagaaagaggccagtcagagctggtgcctcctccgccacagaattctccccaacaagta
ccccaagctgcgtgtccagagccttcaaatccagaaagcccacccacacaaggacagtct
gaaggcttggtccagccatcagcaagtccagctccagtcaacacaggccagcagcctcag
ccaccgcagtcctccagtgcatcggttacatctaccaactccaaccaggcagctgtgcgg
tcagaacagccatggctacacccacctcccactacttttggcccagcacctcaagacttg
gcatcctactactattatagacccccgtatgaagcctaccagtctccgtacccttcaccg
tacccatcagatcctggagcagcctctttatactaccaagatatctatggcctgtatgag
cctcgttacagaccctatgacagctcggcatctgcttatgccgagaaccaccgctactct
gaacctgagcggcccagctcccgtgcaagtcactattctgaccagctcactcccaggcaa
ggatatcctgaaggatactacaattctaagagtggatggagcagtcacagtgactactac
gcaaattactactctggccagtatgattatggagacccaggccgctgggaccgttactat
gggtctcgatttagggaccctcgcacctgggaccggaggtactggtatgactctgaccat
gacccatacaggaaggacaactatgcttacagtgacaggcctgagaaatgtgatgatcac
tggaggtatgaccctcgcttcactgggagcttcgatgatgacactgagctccacagggac
ccctatggagaagaagtagacagacgcagcatccacagcgagcactcagcccggagcctg
cgcagtactcacagcctgcccagccgccgcagcagcctcagctcccattcacaccagagt
cagatttacagaagccaccatgtgactggcggttcctttgaggccccccatgccccaggc
tcatttcatggtgattatgcctatggtacctatgccagcaatttcagcggtgcccatggt
tttccagagtacagctaccctgcagacacctcctggcctgctgcggagcaagttccatca
agaccgacctctcctgagaagtttacagtgcctcacgtctgtgccaggtttggtcctggt
ggtcagctcctcaaagtgatacccaacctgccttcagaaggacagcccgcattggtggag
atccacagcttagagaccttgctgcagcacacacctgagcaggaagaaatgcgctccttc
ccaggacctctcggcaaagatgacactcacaaagtagatgttattaactttgcacaaaac
aaagcgacaaaatgtttgcagaatgaaagtttaattgacaaagagtctgcaagtcttctt
tggaacttcattattctgttatgcagacagaatgggaccgtcgtgggaacagacatcgca
gagctcttgttacgggaccatagaactgtgtggcttcctgggaagtcacccaacgaggca
aacctgatagattttaccaatgaggctgtggagcaagtggaagaggaggagtcaggggag
gcccagctctcatttctcacagacagtcagacagtgaccagcagtgtgctggagaaggag
actgagcggttccgtgaactcttgctgtacggtcggaagaaggatgctctggagtctgcc
atgaaaaatggcttatggggtcacgccctgctgcttgcaagtaagatggacagccggaca
catgcccgtgtcatgaccaggtttgccaacagtcttccgatcaatgaccccctgcagact
gtctaccagctcatgtctggacggatgcctgctgcatccacgtgttgtggagatgagaaa
tggggagattggaggccacatcttgcaatggttttgtccaacctgaacaacaacatggat
gtggaatctcggaccatggctaccatgggtgataccctagcatcaaaaggcctgctggat
gccgcacatttttgctacctcatggcccaggttggatttggggtttatacaaagaaaact
accaaacttgttttgataggctcaaatcacagtttgccatttttaaagtttgccactaat
gaagccattcaaaggacggaggcttatgagtacgctcagtcccttggggcgcatacctgt
tccttacctaacttccaggtgtttaaattcatctacttgtgccgcctggctgaaatggga
ctcgctacacaggccttccactactgtgaagtaatagccaagagtgtcctgacacagcct
actgcatactccccagtgctgattagccagttgattcagatggcttcccagttacgcctc
ttcgatcctcaactgaaggagaagccagaggaggagtcctttgtggagcctgcctggttg
gtgcagctgcagcacgtggagaggcagatccaggagggcactgtgctgtggaaccaggat
ggaactgaaccccagcagtgtcacatcacatcgggctctgaggtggagcagccagatggc
cctggactcaaccagcaggcagggccaagggccgacaaccctctcctgatgccaagcact
gagcctttggtgcacagcgtgcagctgctgcccacagctcctcagacattgcctgatggc
cagcctgctcaccttgccagggtgcccatgttcccagtaccaatgtctcgtccccccctg
gagctgagtgctgcctatggacccccggggtctgtacttggcttcccagaatcctccaga
tctgatcctgcagtgctgcatcctgggcaggccctaccacccgctacaccaggtctccag
gaaagtgggccaccactccaggaggccagaagcccagatccagaaatggtgccacagggc
tcacctgtcagacactcccctcctgagccccgtgaagaggagtttggcaagaacgtcgct
gacctgggctcctctagaacagcacaggactcggaaacctccccagtgtgggatcttggc
agctccagtctgacacgtgccccatctttgacacctgattctgaagggaagaaacctgca
caagctgtcaaaaaggagcccaaggagcccaagaagaccgagtcctggttctctcgctgg
ctgcctgggaagaaaaggacagaagcttatctaccagatgacaagaacaaatcaattgtt
tgggatgaaaagaaaaaccagtgggtgaatctgaatgaaccggaggaggagaagaaggct
ccacccccacctccaacatcgttccccagggttccccaggcggctcccactgggcctgca
ggaccacccatggcctccgtgaatgtgttttctagaaaagcaggtgggtccagagctcgc
tatgtggatgttctcaacccaagtggaacacagcggagtgaaccagctcttgctcctgcg
gatttctttgctcctcttgccccgctgccaatcccttctaacttatttgtaccaaaccca
gatgcagaagagtcacaacctgcagatgggactggctgtaggggacaggcaccagctggg
actcaatctaaggcagagcccaccctggaagccaaggtggtaagctctacagtatcagcc
cctgggcctgaactctcaccctccaaaccagcagatggctcccagggaggagaggctcct
ggagaccactgtcctgcaggggccactcctggtgggtctgtgcccttttacaaccctgcg
cagttggtgcaggcgtctgtcacctcggggacttcaaggccaggaaggattggccaaaga
aaatatgcggcactgaactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (13)   
   UniProt (1)   
   RefSeq(pep) (12)   
DNA sequence (40)   
   RefSeq(nuc) (12)   
   GenBank (14)   
   EMBL (14)   
Protein domain (2)   
   Pfam (2)   
All databases (64)   

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