KEGG   Rattus norvegicus (rat): 100360406
Entry
100360406         CDS       T01003                                 
Symbol
Tsr1
Name
(RefSeq) pre-rRNA-processing protein TSR1 homolog
  KO
K14799  pre-rRNA-processing protein TSR1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rno03009]
    100360406 (Tsr1)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    100360406 (Tsr1)
SSDB
Motif
Pfam: RIBIOP_C AARP2CN
Other DBs
NCBI-GeneID: 100360406
NCBI-ProteinID: NP_001385933
RGD: 2322150
Ensembl: ENSRNOG00000002980
Vega: OTTRNOG00000002074
Position
10:60258790..60270238
AA seq 804 aa
MAAHRSGPLKQQNKAHKGGRHHGGGSAQRDSKGRVGPKILCKKLKKQLSRVDQRHRASQL
RKQKREAVLAEKRQLGSKDGPPHQVLVVPLHNRICLPEAFKLLQNEDLGTVYLNERGSTH
SFMLLSPSLKHRWSFTYARPGDLHTLLDMAKVADTILFLLDPLEGWDSTGDYCLSCLFAQ
GLPTYMLAVQGLPSLPPKRQTDARKKLNKTVEKRFPEDKLLLLDTQQESGMLLRQLANQK
QRHLAFRDRRAYLFAHDADFMPSEESDLVGTLKISGYIRGRTLNVNSLLHIVGHGDFQMN
QIDAPVDPFPLNPRVVKSQKKPSMSMEVCVTDAAADMEEGLKVLMKADPDQQETLQTEVI
PDPMEGEQTWPTEEELDEANDSLKQRSRVVKKVPKGTSNYQAEWILDEGDESDGEGDESD
DDIQHEGFMEEESQDGSGEEEEEECETMTLGESVRDDLYDEKVDEEDEERMLEKYKQERL
EEMFPDEMDTPRDVAARIRFQKYRGLKSFRTSPWDPKENLPRDYARIFQFQNFVNTRKRI
FKEIEEKETEGAEVGWYVTLHVSNVPVSVVESFRQGAPLIAFSLLPYEQKMSVLNMVVSR
SPGNTEPVKAKEELIFHCGFRRFRASPLFSQHTAADKHKFQRFLTADAALVVTVFAPITF
PPASVLLFKQRRNGMHSLIATGHLFSVDPDRMVIKRVVLSGHPFKIFTKTAVVRYMFFSR
DDVLWFKPVELRTKWGRRGHIKEPLGTHGHMKCSFDGKLKSQDTVLMNLYKRVFPKWTYD
PYVPEPVLWVKSDISSTVSEVDME
NT seq 2415 nt   +upstreamnt  +downstreamnt
atggcggctcaccgctccgggccgctgaagcagcagaataaagctcataaaggcgggcgg
caccacggcggtgggtccgcacaacgggacagcaaaggtcgtgtaggaccgaaaatcctg
tgcaagaagcttaagaagcagctcagccgagtagaccagaggcatcgcgccagccagctc
cgaaagcagaagagggaggcggttctggcagagaagaggcagctgggcagcaaggatggg
cctccacatcaggtgctggtggtgcctctgcacaacaggatttgccttccagaggcattt
aaactgcttcagaacgaagacctgggaacagtgtatttgaatgaacggggaagcacccat
agttttatgcttctgagccctagcttgaaacatcggtggtctttcacatatgcaagacca
ggggatctgcatacactattagacatggctaaagttgctgataccatcctgttcctcctg
gacccattagaaggctgggacagtactggggattattgtctatcttgcctctttgctcag
ggccttcccacctatatgctagctgtccagggacttcctagtctcccaccaaagagacaa
acggatgccagaaagaagctaaataaaacagtggagaaacgctttcctgaagacaaactc
ctgctgctggacacccagcaagaatcaggaatgttactcagacagttggctaaccagaag
caaaggcatcttgcttttcgggatcggcgagcttacttgtttgcccatgatgctgacttc
atgcctagtgaggagagtgacttagtgggcaccttgaaaatctcaggctacattcgaggg
aggactctgaatgtaaatagtttgctgcatattgttggacatggtgatttccaaatgaat
caaatagacgcgcctgtggatcctttccctttaaatcctagagtggttaaatcccaaaag
aaaccaagcatgtcaatggaggtttgtgttacagacgctgctgctgacatggaagaaggt
cttaaggttctgatgaaggcagaccctgatcaacaggaaactttacaaacagaggttatt
ccagacccaatggaaggcgagcaaacgtggcccactgaggaggagctggatgaggcaaat
gactcactgaagcaacgctccagggtggtaaagaaggtccctaaaggaacatccaattac
caggctgagtggattctggatgaaggcgatgaaagtgatggggaaggtgatgaatctgat
gatgacatacagcatgaaggtttcatggaagaagagtctcaggatgggagtggcgaggag
gaagaggaggaatgtgaaaccatgactctaggggagtctgtgcgtgatgacctatacgat
gagaaagtagatgaagaggacgaggagagaatgttagagaaatacaaacaagaaagattg
gaagagatgtttccagatgaaatggatacccctcgtgatgtggccgctagaattcgattt
cagaaatatagaggcctcaagagcttccggacgtctccttgggaccctaaagaaaacctt
cctagagattatgctcggatttttcagtttcagaattttgttaataccagaaaaagaatc
tttaaagagattgaggaaaaagaaactgaaggagctgaggttggttggtacgtcacactt
catgtttctaatgtccctgtctcggtggtcgagtctttcaggcaaggagcgcccttgatt
gcattttctttgctaccttatgaacagaagatgtcagtattgaacatggtggtgagccgc
agccctggcaacacggaacctgtgaaggcgaaagaagaattgatcttccactgtggattc
aggcgcttccgagcttcacctttattctctcagcacacagcagctgataaacataaattt
caaagattcctgactgctgatgcggccttagtggtgacagtatttgcaccaatcacgttc
cctcctgcatctgtgctgcttttcaagcagaggagaaatggaatgcacagcctcattgct
acaggccatctgttttcagtggatccagacaggatggtcataaagagagtggttctaagt
ggtcatcctttcaaaatttttactaagacggcagtagtgcgctacatgttcttcagcaga
gacgatgtgctgtggtttaagcctgtggaactgagaaccaagtggggccgccggggacac
atcaaagagccgctgggtacacatggccatatgaagtgcagttttgatgggaagctaaaa
tctcaggatacagtattaatgaatctctataagcgagtgtttcccaaatggacttatgac
ccgtatgtaccagagccagtactttgggttaaaagtgacatctcttcaacagtgtctgaa
gtagacatggagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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