KEGG   Rattus norvegicus (rat): 100360682
Entry
100360682         CDS       T01003                                 
Symbol
Snrpe
Name
(RefSeq) small nuclear ribonucleoprotein E
  KO
K11097  small nuclear ribonucleoprotein E
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100360682 (Snrpe)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    100360682 (Snrpe)
   03041 Spliceosome [BR:rno03041]
    100360682 (Snrpe)
   03032 DNA replication proteins [BR:rno03032]
    100360682 (Snrpe)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     100360682 (Snrpe)
Spliceosome [BR:rno03041]
 Complex A
  U1 snRNP components
   Sm proteins
    100360682 (Snrpe)
  U2 snRNP components
    100360682 (Snrpe)
 Complex B
  U1 snRNP components
    100360682 (Snrpe)
  U4/U6.U5 tri-snRNP components
    100360682 (Snrpe)
 Complex C
  U2 snRNP components
    100360682 (Snrpe)
DNA replication proteins [BR:rno03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     100360682 (Snrpe)
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 100360682
NCBI-ProteinID: NP_001258166
RGD: 2321675
Ensembl: ENSRNOG00000067587
UniProt: A6IC83
Position
13:complement(47596324..47609390)
AA seq 92 aa
MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEIHSKTKSRKQLGRIMLKGDNITLLQSVSN
NT seq 279 nt   +upstreamnt  +downstreamnt
atggcgtaccgcggccagggccagaaggtgcagaaggtgatggtgcagcccatcaacctt
atcttcagatacttgcaaaatagatctcgaattcaggtgtggctgtatgaacaagtgaat
atgcggatagagggttgtattattggctttgatgagtacatgaacctcgtattagatgat
gcagaagaaattcattctaaaacaaagtcaagaaaacaactgggtcggatcatgctcaaa
ggagataatattactctgctccaaagcgtttccaactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (1)   
   RefSeq(pep) (9)   
DNA sequence (11)   
   RefSeq(nuc) (9)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (35)   

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