KEGG   Rattus norvegicus (rat): 100362764
Entry
100362764         CDS       T01003                                 
Symbol
Ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
  KO
K14809  ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rno03009]
    100362764 (Ddx55)
Enzymes [BR:rno01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     100362764 (Ddx55)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    100362764 (Ddx55)
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII Helicase_C_2 SBF_like
Other DBs
NCBI-GeneID: 100362764
NCBI-ProteinID: NP_001258255
RGD: 2324094
Ensembl: ENSRNOG00000001043
UniProt: A6J0Y4 D3ZX56
Position
12:complement(37695444..37711198)
AA seq 600 aa
MEHVTEGSWESLQVPLHPLVLGALRELGFLHMTPVQSATIPLFMRNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKNQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGG
RNPGEDVERFKQHGGNIIVATPGRLEDMFRRKAEGLDLASYVKSLDVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQKTPS
RLENHYMICKADEKFNQLVHFLRSRQQEKHLVFFSTCACVEYYGKALEALVQRVKILCIH
GKMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTA
RIGHGGSALVFLLPMEEAYINFLAINQKCPLQEMSLQRNTVDLLPKLRAMALADRAVFEK
GMKAFVSFVQAYAKHECSLIFRLKDLDFAGLARGFALLRMPRMPELKGKQFPDFVPVDID
TDTIPFKDKIREKQRQKLLEQKRKERTENEGRRKFIKNKAWSKQKAKKERKKKMNAKRKK
DEGSDIDDEDMEELLNDTRLLKKFKKGKITEEEFEKGLLTSTKRTVRLTESGVSDSEEDS
NT seq 1803 nt   +upstreamnt  +downstreamnt
atggaacacgtgacggagggttcctgggagtcgctgcaggtgccgctgcatcctctggtg
ctcggagctctgcgcgagttgggcttcctgcacatgacgccggtgcagtctgccaccatc
cctctgttcatgagaaacaaagatgttgctgcagaagccgtcaccgggagtggaaaaact
ctggcttttgtcatccccattctggagatccttctgagaagggaggagaagttaaagaag
aaccaggtaggagccatcgtcatcacccccactcgggagctggccattcagattgatgag
gtcctgtcacacttcacgaagcacttcccgcagttcagccagattttgtggattggaggc
cggaaccctggagaagatgtggagaggttcaagcagcacggtgggaacatcattgtggca
accccaggccgcctggaggacatgttccggaggaaggctgagggtctggacctggccagc
tatgtgaagagcttggatgtcctggtgctggacgaggcagacagacttctcgacatgggc
tttgaggcaagcataaacacaatcctggagtttttgccaaagcagaggcgaacaggcctt
ttctcggccactcagacacaggaggtggagaacttggtgcgagcaggcctccgcaaccct
gtccgaatctctgtgaaggagaagggcgtggcagccagcagcacccagaagacaccgtct
cgtctggagaaccactatatgatatgtaaggcagatgagaaattcaaccagctggtccat
ttccttcggagccgtcagcaggaaaagcacctggtcttcttcagcacgtgcgcgtgtgtg
gaatactatggaaaggccctggaggcgctggtgcagagggtgaagatcctgtgcatccac
gggaagatgaagtacaagcgcaataagatcttcatggagttccgcaagctgcagagtggg
atcttggtgtgcactgacgtgatggcccggggaattgatattcctgaagtaaactgggtt
ttgcagtacgaccctcccagcaacgccagtgccttcgtgcatcgatgtggacgcactgcc
cgaattggccacggtggcagtgctctggtgttcctgctgcccatggaggaagcgtacatc
aacttcttggccatcaaccagaaatgccccctgcaggagatgagcctccagagaaacact
gtagaccttctacccaagctccgggccatggccttggctgacagagccgtgttcgagaag
ggcatgaaagccttcgtgtcctttgttcaggcttatgcaaagcacgagtgcagtctcatc
ttcaggttgaaggatcttgactttgctgggcttgctcgaggctttgccctgctgaggatg
cccaggatgccagaactaaaggggaagcagtttccagattttgtaccagtggacattgat
actgacacaatcccatttaaggataaaattagagaaaaacagaggcagaaacttttggag
caaaaaagaaaagagaggacagaaaatgaagggagaagaaaattcatcaaaaataaagct
tggtcaaagcagaaggccaaaaaggaaaggaagaagaagatgaatgcaaagaggaaaaag
gatgagggttctgatattgatgatgaggacatggaggaactccttaatgacacaaggctc
ttgaaaaaatttaaaaaaggtaaaatcacagaagaagaatttgagaaggggctgttgaca
agtaccaaaagaacagtccggctgacagagtcaggtgtctcggactcagaagaggacagt
tga

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

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