KEGG   Rattus norvegicus (rat): 100909408
Entry
100909408         CDS       T01003                                 
Symbol
Zfp397
Name
(RefSeq) zinc finger protein 397
  KO
K09230  SCAN domain-containing zinc finger protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    100909408 (Zfp397)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    100909408 (Zfp397)
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 SCAN zf-C2H2_4 zf-C2H2_6 Zn-ribbon_8 XPA_N zf-C2H2_11 zf-C2H2_jaz C1_4 GATA zinc_ribbon_15 zf-LYAR
Other DBs
NCBI-GeneID: 100909408
NCBI-ProteinID: NP_001258404
RGD: 6504280
Ensembl: ENSRNOG00000048101
UniProt: M0R6E4
Position
18:15516514..15523056
AA seq 527 aa
MAMESRAISTLKPQDHQEELILVKIEDSSFSWSQKCKQNGSAQSCQELFRQQFRKFCYHE
TPGPREALGRLQELCHQWLMPELHTKEQILELLVLEQFLSILPEELKIWVQQHGPKSGEE
VVTLLEDLEKEFDDPGQQVPDNPQGPSVSWKDLTYLRTSQDSTSIQVRPLKTQLKSWKPC
LSSKNDSKNNETTAKEDISEEKAPEFSWDPSFRGVSEHKSNLEWQQRSSPLHRGSFSQVI
FTHKSLAKRDHHDESQRCLILSTNSVTCQKVSTDDRPYRCDVCGHSFKQHFSLTQHQRIH
TGEKPYKCNQCGKAFSLRSYLIIHQKIHSGEKAYECNECGKAFNQSSALTRHRKIHTGEK
ACKCNECGKAFSQSSYLIIHQRIHTGEKPYRCNECGKTFSQSSKLIRHQRIHTGERPYEC
NECGKAFKQSSELITHQRIHSGEKPYECNECGKAFSLNSNLIRHQRIHSGEEPYQCNDCG
KTFKRSSALVQHQRIHSGDEAYICNECGKAFRHRSVLMRHQRVHDIK
NT seq 1584 nt   +upstreamnt  +downstreamnt
atggctatggaatccagagcaatttcaactttaaaacctcaggatcatcaagaagaatta
atactcgtgaaaatagaagacagcagcttttcttggagccagaaatgtaaacagaatggg
agtgcccagtcttgccaagaactgtttcgccagcaattcaggaagttttgctatcatgaa
acacctgggccccgagaggctctgggaagactccaggaactctgccatcagtggctaatg
ccagagttgcacacaaaggagcagatcctggaactgctagtgctggagcagttcctgagc
atcctccctgaagagctgaagatatgggttcaacagcacggcccaaagagcggtgaggaa
gttgtgactctgctggaagatttggagaaagagtttgatgatccagggcagcaggtccca
gataatccacaaggaccatcagtgtcatggaaagatttgacatatctcagaacatcccaa
gattcaacaagcatccaagtccggcctctgaagacacagctgaaatcctggaaaccttgt
ctttcctctaaaaatgattctaagaataatgaaacaacagcaaaagaggacatttcagaa
gaaaaagcaccagaattctcttgggatccttcatttagaggtgtcagcgagcacaaaagc
aatttagaatggcagcaaagaagttcccctctccacaggggcagctttagtcaagtgatc
ttcacacacaaatccttagcaaagagagaccatcatgatgagtctcaaagatgcttgatt
ctaagtacaaactctgttacatgtcagaaagtttctacagatgacagaccttatagatgt
gacgtatgtgggcatagctttaaacaacatttctctctaacacaacatcagagaatacac
actggagaaaagccctataaatgtaatcagtgtgggaaggcctttagtttgaggtcatat
cttattattcatcagaaaatccatagtggtgaaaaagcatatgagtgcaatgaatgtgga
aaggccttcaatcagagctcagctctcactagacatcggaaaattcatacaggtgagaaa
gcttgtaaatgtaatgagtgtggaaaagcattcagtcaaagttcttatttaatcatacat
caaagaatccacactggtgagaaaccctacaggtgtaatgaatgtgggaaaacctttagc
cagagttcaaagcttattagacaccagcggattcatacgggagagagaccatatgaatgt
aatgaatgtggcaaagctttcaagcagagctcagagctgattacccatcagaggatacac
agtggagagaaaccttacgaatgtaacgagtgtggaaaagccttcagtctgaactcaaac
ctcataagacatcagagaatccacagtggagaggagccttatcagtgtaatgactgtggc
aaaaccttcaaaaggagctcagcccttgttcagcaccagagaatccactctggagatgaa
gcttatatatgtaatgagtgtgggaaggcttttaggcacaggtcagtgttgatgcgccat
cagagagtccacgatattaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (13)   
   Pfam (13)   
All databases (29)   

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