KEGG   Rattus norvegicus (rat): 100911462
Entry
100911462         CDS       T01003                                 
Symbol
Txnl4a
Name
(RefSeq) thioredoxin-like protein 4A
  KO
K12859  U5 snRNP protein, DIM1 family
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100911462 (Txnl4a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    100911462 (Txnl4a)
Spliceosome [BR:rno03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    100911462 (Txnl4a)
SSDB
Motif
Pfam: DIM1 Thioredoxin Thioredoxin_8 Thioredoxin_7
Other DBs
NCBI-GeneID: 100911462
NCBI-ProteinID: NP_001296097
RGD: 6492735
Ensembl: ENSRNOG00000057774
UniProt: A6K5G5 D3ZSW5
Position
18:75934085..75949873
AA seq 142 aa
MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL
VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY
RGARKGRGLVVSPKDYSTKYRY
NT seq 429 nt   +upstreamnt  +downstreamnt
atgtcgtacatgcttccgcatctgcacaatggctggcaggtagaccaggccattctttcg
gaggaggaccgcgtggtcgtcattcgcttcggacacgactgggaccccacttgcatgaag
atggacgaggttctgtacagcattgccgaaaaggttaaaaattttgcagttatttatctt
gtggatattacagaagtacctgacttcaacaagatgtatgagctctatgacccatgcacg
gtcatgttcttcttcagaaacaaacacatcatgattgatttgggcactggtaacaataac
aagatcaactgggccatggaagacaagcaggaaatggttgacatcatagagaccgtgtac
cgtggcgcccgcaaaggccgaggcctggtggtgtcgcccaaggactattccacaaagtac
agatactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (4)   
   Pfam (4)   
All databases (26)   

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