KEGG   Rattus norvegicus (rat): 100912416
Entry
100912416         CDS       T01003                                 
Symbol
Tcaf2c
Name
(RefSeq) TRPM8 channel-associated factor 2
Organism
rno  Rattus norvegicus (rat)
SSDB
Motif
Pfam: Peptidase_M60 M60-like_N Phage_Mu_Gp48
Other DBs
NCBI-GeneID: 100912416
NCBI-ProteinID: XP_063143015
RGD: 1591778
Ensembl: ENSRNOG00000066894
Vega: OTTRNOG00000001054
Position
4:complement(72520327..72543150)
AA seq 919 aa
MATTPDAAFEALMNGVTSWDLPKEFTPSELLLIGEAAFPVMVNDKGQVLIAASFYGQGRL
VVLSHEGYLLHAGLAPFLLNAVSWLCPSPEAPIAVHSSLASLVNILRDSGVNALVQPEPG
EALGVFCIDAYNDTLTEKLVQFVKHGGGLLIGGQACNWASQQGSDKVLFSFPGNQVTSVA
GVYFTDVYGGINRFKVSKKVPKIPLHIRCWEELRRDQEQLLDGISMLDIRTGGVPSQLLV
HGSLAFPVGLDNSFLSCFLAAARYGCGRVVLAAHEAMLCAPKMEPFLLNAIRWLSRDQGK
TIGVNKSLKNLNSLLLKHGVKCSLESHLTSDMGVYCCVAYSDQDAKKIQEFVAEGGGLLI
GGQSWWWASQNQGSSALRSFPGNVVLNPFGLSILPQTISPGCFPVLPIDIRNYHFRRALS
EFQAMVNHKGGNLEKKYFGKLGVDGAGFLQIPAKGVPAYISVHRILRKMLRQAGLPAVSK
NNPVSSQSCEAALLCLATELAHSGTDCSQIAHNHGTQTCSSDLCSSEHPITVEINGTNTG
DSDVWMSTGLYLLEGQSTEISLSEPAASAGLKVQIGCHTDNLSHARQLFRAPVVTYQCCM
DRTQRSVSCLWGGLLYIIVPKGCQLGPVSVTITKAVPAPYYKLGKTSLEEWKSCMQKNLG
PWGELATDSVILTVPTESLKNLEDPAPLLQLWDEIMKAVAKLAAQPFPFERPERIVTDVQ
ISNGWMHSGYPIMCHVESVQELVSLADIRSKGLWGPIHELGHNQQRSGWEFRPHTTEATC
NLWSVYVHETVLGIPRAQAHPQLKPEEREKRIKEHLQKGAPLSDWKVWTALETYLQLQEV
FGWEPFMNLFAEYQCIVHIPKDNESKMNLWLKLFSEKVQKNLVPFFEAWGWPIQKPVAEA
LACFPSWQDHPLKMYIGME
NT seq 2760 nt   +upstreamnt  +downstreamnt
atggcaacaactcctgatgctgcttttgaggccctcatgaatggagtgaccagctgggat
ctccctaaagaattcactcccagtgaactccttcttattggagaggcagccttcccagtg
atggtgaacgacaagggccaggtgctcattgctgcctctttctatggccaaggccgcctg
gtggtcctatcccatgagggctacctgctgcatgctggcttggctccatttcttctcaat
gcagtgagctggctctgcccctccccggaggctcccattgcagtgcattcttccttggca
tccttagttaacatcctcagggactctggggtaaacgcactggttcagcctgagcctgga
gaggctctgggagttttttgcattgatgcctacaatgacaccttgaccgagaagctagtt
cagtttgtgaagcatggtgggggcttgctcattggaggccaggcctgcaattgggccagt
caacaggggagtgacaaagtgctgttcagtttccctgggaaccaggtgacaagtgtggct
ggagtgtacttcactgatgtctatgggggtataaaccggttcaaggtctctaagaaggta
cccaagatccccctccatatcaggtgttgggaggagctcaggcgtgaccaggagcagctt
ctggatgggatctctatgttggacatcaggactgggggtgtcccctcacagctgttggta
catgggtccctggccttccctgtgggccttgataactccttccttagctgcttcctagca
gctgcccgctatggttgtggtcgggtggtgttggctgcacacgaggccatgctctgtgct
cctaaaatggaaccctttttgctcaatgctatacgttggttgtccagagaccagggaaag
actattggggtgaacaaaagtctcaagaatctgaattccctattgttgaagcatggagtg
aagtgcagcctggagtcccatttgaccagtgatatgggtgtctactgctgtgtagcttat
agtgaccaggatgccaagaaaatacaggagtttgtagcagagggtggggggttgctcatt
ggtggtcagtcctggtggtgggcttcccagaaccaaggcagctctgcattgcgtagtttc
cctgggaatgtcgtcctcaatccctttggcctcagcattttgcctcagaccatcagccca
ggctgtttccctgtccttcctatagacataaggaactaccattttcgaagggctctttct
gagttccaggctatggtgaaccacaagggtgggaacttggaaaagaagtattttggaaaa
ttgggagtagatggagcaggctttcttcagattcctgcaaagggagttcctgcttatata
tctgtgcaccggatcctgaggaagatgctacgtcaggcaggcctccctgctgtgagcaag
aataacccggtgtccagtcagtcctgtgaggctgcactgctctgtctagccacagagctg
gcacattctgggactgattgctcccagatagctcataaccatggcactcagacctgctcc
tctgatctctgctcctcagaacatcccattacagtggagatcaatggaaccaacacaggt
gacagtgatgtctggatgagtactgggctctacctcctggaaggacaaagcacagagatt
tctctctctgaacctgctgcctcggctggcctgaaggtgcagatcggatgtcacactgat
aatctcagtcatgccagacagctgttccgagcccctgtggtaacgtatcagtgctgtatg
gacagaacccaacggtcagtctcctgcctctggggtggtctcctgtacatcattgtgccc
aaaggctgtcaacttggccctgtatctgtcaccatcacaaaggcagtgcctgccccatac
tacaagctaggtaagacatcactggaggagtggaagagctgcatgcagaagaacctgggg
ccctggggagagttggccacagacagtgtcatcctgacagtgccaaccgaaagcctgaag
aatctggaagatccagctcctctgctccaactctgggatgagattatgaaggctgtggcc
aagctggcagcccagcccttcccttttgaaaggcctgagagaattgtcactgatgttcag
atatcaaatggctggatgcattcaggataccccatcatgtgccatgtggaatctgtgcaa
gaactagtcagtttggcagacataagaagtaagggcctatggggacccatccatgagctg
ggccacaatcagcaacgcagtggttgggagttccgcccacataccaccgaggccacctgc
aatctctggtcagtctatgttcatgagacagtcctggggattcccagagctcaggcccac
cctcaactgaaacctgaagaaagagagaagaggatcaaagaacaccttcagaagggagca
cccctgagtgactggaaggtttggacagcactggagacatatctgcagctccaggaggtc
tttgggtgggagccattcatgaacctctttgctgaataccaatgcattgttcacatcccc
aaagacaatgagagcaagatgaacttatggctgaagttgttctctgagaaagtgcagaag
aacctggttcctttctttgaagcctggggctggcctatccagaagccagtggctgaagcc
ctggcctgctttccttcctggcaggatcaccccttgaagatgtacattgggatggagtag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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