KEGG   Rattus norvegicus (rat): 102554393
Entry
102554393         CDS       T01003                                 
Symbol
Adamts13
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X1
  KO
K08627  a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:3.4.24.87]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rno01002]
    102554393 (Adamts13)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.24  Metalloendopeptidases
    3.4.24.87  ADAMTS13 endopeptidase
     102554393 (Adamts13)
Peptidases and inhibitors [BR:rno01002]
 Metallo peptidases
  Family M12: astacin/adamalysin family
   102554393 (Adamts13)
SSDB
Motif
Pfam: ADAMTS_CR_3 TSP1_ADAMTS ADAMTS_spacer1 TSP_1 ADAMTS_CR_2 Reprolysin Reprolysin_4 Reprolysin_3 Reprolysin_5 TSP1_spondin Peptidase_M10 Reprolysin_2 TSP1_CCN
Other DBs
NCBI-GeneID: 102554393
NCBI-ProteinID: XP_006233941
RGD: 1311594
Ensembl: ENSRNOG00000005780
UniProt: D4A0T9
Position
3:30697354..30736539
AA seq 1482 aa
MDEKFPGGTVGSQATWDGTCRDREPLTSLSSCRPGVSSQNESQSPGLPSGHRLPVLRMSQ
LCLWLPCQPFLAASIRGILTGAIFILGCWGLSDFQKSFLQDLEPKDLSSSFSRHTAPLTG
HPSSHLQRLRQRRTSEDILHLELLVAVGPDVYQAHQEDTERYVLTNLNIGSELLRNPSLG
AQLQVHLVKLIILSDSENTPNITTNITSSLMSVCEWSQTINPHDDRDPSHADLIIYITRF
DLELPDGNQQVRGVTQQGGACSPSWSCLITEDTGFDLGVTIAHEIGHSFGLDHDGAPGSG
STCEARGHVMASDGAVPAGGALEWSTCSQRQLQHLLSTGQMHCLWDPPGLQSGLTWHQLV
AQPGLFYSADDQCRVAFGAGAVACTFSREGLDVCQALSCHTDPLDQSSCSRLLVPLLDGT
ECGVEKWCSKARCRSLAELAPVAVVHGHWSSWGPHSPCSRSCGGGVITRRRWCNNPRPAF
GGRACVGEDLQAKMCNTQACEKTQLEFMSEQCAQTDRHPLQLSQGSASFYHWDAAVQYSQ
GDTLCRHMCWAVGESFIVSRGDSFLDGTRCVPNGPREDGTVSLCLLGSCRTFGCDGKMDS
QQVWDACQVCGGDNSTCTSQNGSFTAGRAREYVTFLIVTPNMTSAHVINHRPLFTHLAVR
IQDHYIVSGKSSMSPNVTYPSLLEDYRVEYRVTLTEDQLPRLEEIHIRGPVRDDIEIQVY
RRYGGEYGGLTHPDITFTYFQRKQQAAWVWAAKRGPCSVSCGAGLRWVTYSCQDQAQNKW
VRNAQCQGSPQPPAWQEPCVSAPCPPHWVADDFGPCSVSCGGGLRERSLRCVEAHNGFLK
TLPPAPCRAVAQQPAGEVENCNSQPCPTGWEVSDPSPCVSSACEPGLESGSGTCVPRVGD
SEKPAMAGPCRPDDMSPVPEPCVRTTCSPGSGPVDTMSLGEEASSPVGSGKPSSQAEHVW
TPLVGLCSISCGKGLKELYFLCMDSVLKMPVQEELCGLASKPPSRWEVCRARPCPARWET
RVLAPCPVTCGGGRVPLAIHCVQLDHGRPVSVPHSKCWPAPRPGSFEDCSPEPCPARWKV
LPLGPCSASCGLGTATQMVACVQLDQGHDNEVDETFCKALVRPPASVPCLIADCAYRWHI
STWTECSVSCGDGIQRRHGTCLGPQAQVPVPANFCQHLPKPVTVRGCWAGPCAGQKISSS
LPHKEATLPSQTLAAVTAASLQWSQPQAQAHSLFPDSQSLGLQETLEEPGACGRQYLEPT
GTIDMRGQGQLDCVVAIGRPLGEVVTLQILESSLKCRAGELLLLWGKFTWRKMCWKMSGR
TFSTKANTVVVRQHRVLPGGGVLLLYRSQPAPGTFYKECDRQLFGPRGEITSPSLSPDGR
KAGTCRVFVSVAPQARIAIRALASDMGTASEGTSANYVSIRDIHGLKTTTFWGQQVLYWE
SEGSEAELEFSHGFLEAHASFQGQYWTIPPRTPEQVNSVALS
NT seq 4449 nt   +upstreamnt  +downstreamnt
atggatgagaaattcccaggaggtacagtgggaagccaggcaacttgggacggtacttgc
agagatagagaaccacttacctctctctccagctgcaggccaggcgtttcgtctcaaaac
gaatcccagtcaccagggctcccgtccggccatcggctgcctgttctaaggatgagccag
ctttgcttatggttgccgtgccagccttttcttgctgccagtatcagaggaatcctcacg
ggcgccatcttcattctgggctgctgggggctctctgatttccagaagagttttcttcaa
gatctggagcccaaggacttatcttcctccttcagccgccatactgctccactcacaggc
catccttcctctcacctccagagactgagacagaggaggacttcggaggacattctgcac
ctagaactcctggtagctgtgggccccgatgtttaccaggctcaccaggaggacacagag
cgctacgtgctcaccaacctcaatatcgggtcagaactgttgagaaacccgtccctaggg
gctcagctccaagtgcacctggtgaagctgatcattctctcggactcagagaatactccg
aatatcacgaccaacatcacctcatccttgatgagtgtctgcgagtggagccagacgatc
aatccccatgatgacagggacccaagtcatgctgacctgatcatctatataaccaggttt
gacctggagctgccggatggtaaccagcaggttcggggagtcacccaacagggtggtgcc
tgctctccttcctggagttgccttatcactgaggacactggcttcgatctgggggtcacc
attgcccacgagattggacacagctttgggctggaccatgatggtgctccaggcagtggc
agcacctgcgaggcccgtggccatgtgatggcatctgacggcgcagtgcctgctggaggg
gccctggagtggtccacctgcagccaaaggcagctgcagcacctgctcagcacagggcaa
atgcactgcctctgggacccgcccgggctgcagtcaggactcacatggcaccagctggtg
gcacagcctggcctcttctacagtgcagatgaccagtgccgtgtggctttcggcgccggg
gctgtcgcctgcaccttctccagggagggtctggatgtatgccaggctctgtcctgtcac
acagaccccctggaccaaagcagctgcagccgcctccttgttcctctcctggacgggaca
gaatgtggtgtagagaagtggtgctctaaggctcgctgtcgctccctagctgagctggct
cctgtggctgtggtacatggacactggtctagctggggcccccacagtccttgctctcga
tcctgtggaggaggtgtgatcaccaggagacggtggtgcaacaaccccaggcctgcattt
gggggacgtgcatgtgtgggcgaggacctccaggctaagatgtgcaacacgcaggcttgt
gagaagactcagctggagttcatgtcagagcagtgtgcccagacagacagacatccactg
caactttcccaaggcagtgcctccttctaccactgggatgctgctgtgcagtatagtcaa
ggggatactctgtgcagacacatgtgctgggctgttggagaaagtttcattgtcagccgt
ggggacagtttcctcgatgggacccgttgtgtgccaaatggtcctcgggaggatgggacc
gtgagcctctgtttgttgggtagctgcaggacctttggctgtgatggcaagatggactcc
cagcaggtttgggatgcgtgccaggtgtgtggaggagacaacagcacctgcacttcccaa
aatggctctttcacagctgggagagccagagagtatgtcacgttcctgatagtcactccc
aacatgaccagcgcacacgtcatcaaccacaggcctctcttcacacacttggcggtgagg
atccaggaccactacattgtgtcagggaagagcagcatgtcgcctaacgtcacgtaccct
tcccttctggaggactaccgcgtggagtacagagtaactctcactgaggaccagctgccc
cgcttagaggagattcacatccggggacctgtccgggatgacattgagatccaggtgtac
agacgatatggaggagaatatgggggtcttacacacccagacatcacctttacctacttc
caacggaagcagcaggcagcctgggtatgggccgctaagcgtgggccctgctcagtgagc
tgtggggcagggctgcgctgggtgacctacagctgccaggatcaagctcaaaacaagtgg
gtgaggaacgcccagtgccaagggagcccgcagccacctgcatggcaggagccttgtgtc
tctgccccgtgccctccacactgggtagctgacgactttggcccatgcagcgtgtcttgt
ggcggaggccttcgggagcggtcactgcgctgtgtagaggcccacaatggcttcttaaag
acgttgccgccagccccatgcagagcagtagcccagcagccagcaggagaggtagaaaac
tgcaactcccagccctgccccactggatgggaggtgtcagaccctagcccttgcgtgtca
tctgcgtgtgaacccggtctggagtcagggagtgggacatgtgtgcccagggtgggtgac
tcagagaagccagcgatggcaggcccctgccgcccggatgacatgtcacctgtgccggag
ccctgcgttaggaccacatgttctccaggctcgggtccggtggacaccatgtctctggga
gaggaggcttcatccccagtgggcagtggcaagccaagctctcaggctgaacatgtgtgg
actcctctggtggggctgtgctccatttcttgtgggaaaggtctgaaggagctgtatttc
ctgtgcatggattctgtcctcaagatgcctgtccaggaagagctatgtggcttggccagt
aagcccccaagccggtgggaggtctgcagggctcgcccatgtcctgctcggtgggagact
cgagtcttggcaccgtgtccggtgacctgtggcggggggcgagtgccgctggccattcat
tgtgtgcagctggaccacgggcgccctgtgtctgtacctcactccaagtgctggccagca
cctaggccaggctccttcgaggactgcagccctgagccttgtcctgctagatggaaagtc
ctgccccttggcccgtgctcagccagctgtggccttggcactgccacacaaatggtggcc
tgcgtgcagcttgaccaaggccatgacaatgaggtggatgaaactttctgtaaggctctg
gtgcggccccccgccagtgttccctgcctcattgctgactgtgcataccggtggcacatc
agcacctggacagagtgctccgtctcctgtggggatggcatccagcgccggcatggcacc
tgcctcggaccccaggctcaagtgcctgtgccagccaacttctgccagcacctgcccaag
ccagtgactgtgagaggctgctgggctggaccctgtgcagggcagaagatctccagctcg
ctgcctcacaaggaagctactcttcccagccagaccctggctgcggttactgctgcctct
ctgcaatggtcccagccccaagcccaggcccacagccttttcccagactcccagtctctg
gggctccaggaaaccctggaagagcctggagcctgtggaaggcaatacctggagcccaca
ggaaccattgacatgcgaggtcaaggacagctagactgtgtggtagccatcgggagacct
ctaggtgaagtggtgaccctccaaatcctcgagagctccctcaagtgcagagcaggggag
ctgctgctgctctggggtaagttcacatggcggaagatgtgctggaagatgtctggcagg
actttcagcacaaaagccaacacggtggtggtgaggcagcatcgtgtgctgccgggaggt
ggagtgctgctactgtaccggagccaacctgccccagggaccttctacaaagaatgtgac
aggcagctctttggacctcggggtgaaatcacgagtccctcactgagcccagacgggagg
aaggcaggaacctgcagggtctttgtcagtgtggccccacaggcccgaattgccatccgt
gccctggccagtgacatgggcactgcttctgaggggaccagtgccaactatgtctcgatc
agggatatccacggtctgaagactacaacattttgggggcagcaggtgctctactgggag
tccgaaggcagtgaggctgaactggagtttagccatggcttcctggaggcgcatgccagt
ttccagggccagtattggaccatcccaccgaggacaccggaacaggtcaacagcgtggct
ctgtcctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (1)   
   RefSeq(pep) (9)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (13)   
   Pfam (13)   
All databases (43)   

Download RDF
DBGET integrated database retrieval system