KEGG   Rattus norvegicus (rat): 113975
Entry
113975            CDS       T01003                                 
Symbol
Pom121
Name
(RefSeq) nuclear envelope pore membrane protein POM 121
  KO
K14316  nuclear pore complex protein Nup121
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03013  Nucleocytoplasmic transport
rno05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    113975 (Pom121)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    113975 (Pom121)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    113975 (Pom121)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     113975 (Pom121)
SSDB
Motif
Pfam: POM121
Other DBs
NCBI-GeneID: 113975
NCBI-ProteinID: NP_446074
RGD: 620680
Ensembl: ENSRNOG00000001449
UniProt: P52591
Structure
Position
12:26913513..26930861
AA seq 1199 aa
MSPAAAAADGGERRRPPLGVREGRGRTRGCGGPAGAAALGLALLGLALYLVPAAAALAWL
AVGASAAWWGLSREPRGPRGLSSFVRESRRHPRPALTASPLPAKSPVNGSLCEPRSPLGG
PDPAELLLMGSYLGKPGPPEPALPQDPRDRPGRRPPSRSPPSSSTAQRVHHVYPALPTPL
LRPSRRPPHRDCGPLSSRFVITPRRRYPIQQAQYSLLGALPTVCWNGGHKKAVLSARNSR
MVCSPVTVRIAPPDSKLFRSPMPEQILSTTLSSPSSNAPDPCAKETVLNALKEKKKRTVA
EEDQLHLDGQENKRRRHDSSGSGHSAFEPLVANGVPAAFVPKPGSLKRSLASQSSDDHLN
KRSRTSSVSSLTSTCTGGIPSSSRNAITSSYSSTRGVSQLWKRSGPTSSPFSSPASSRSQ
TPERPAKKTREEEPCHQSSSSAPLVTDKESPGEKVTDPATGKQQSLWTSPPTPGSSGQRK
RKIQLLPSRRGDQLTLPPPPELGYSITAEDLDMERRASLQWFNKVLEDKTDDASTPATDT
SPATSPPFTLTLPTVGPAASPASLPAPSSNPLLESLKKMQESPAPSSSEPPEAATVAAPS
PPKTPSLLAPLVSPLTGPLASTSSDSKPTTTFLGLASASSATPLTDTKAPGVSQAQLCVS
TPAATAPSPTPASTLFGMLSPPASSSSLATPGPACASPMFKPIFPATPKSESDNPLPTSS
SAATTTPASTALPTTATATAHTFKPIFESVEPFAAMPLSPPFSLKQTTAPATTAATSAPL
LTGLGTATSTVATGTTASASKPVFGFGVTTAASTASTIASTSQSLLFGGAPPVTASSSAP
ALASIFQFGKPLAPAASVAGTSFSQSLASSAQTAASNSSGGFSGFGGTLTTSTSAPATTS
QPTLTFSNTVTPTFNIPFSASAKPALPTYPGANSQPTFGATDGATKPALAPSFGSSFTFG
NSVASAPSAAPAPAAFGGAAQPAFGGLKASASTFGTPASTQPAFGSTTSVFSFGSATTSG
FGAAAATTQTTHSGSSSSLFGSSTPSPFTFGGSAAPAGGGGFGLSATPGTGSTSGTFSFG
SGQSGTTGTTTSFGGSLSQNTLGAPSQSSPFAFSVGSTPESKPVFGGTSTPTFGQSAPAP
GVGTTGSSLSFGAPSTPAQGFVGVGPFGSGAPSFSIGAGSKTPGARQRLQARRQHTRKK
NT seq 3600 nt   +upstreamnt  +downstreamnt
atgtctccggcggctgcggcggctgacggaggcgagcggcggcggcctccgttgggcgta
cgggaaggccggggccggacccgcggctgcggaggaccagcgggtgccgcggcactgggc
ctagcgctgctcggcctcgcgctctacctagtgcccgcggcggccgcgctggcctggctg
gccgtgggggcgagcgcggcctggtggggcctgagccgagaaccccgcggcccgaggggc
ctgtcgtcgttcgtgcgcgagtcgcgccgtcacccgcggcccgcgctcaccgcttcaccg
cttccagccaagtcgccagtcaacggtagcctctgcgaaccccgcagcccgcttggaggc
cccgaccccgctgaactcttactcatgggcagctacctgggcaagccaggcccgccggag
cctgccctcccgcaggaccctagagacaggccagggcgccgcccaccctcacggtccccg
ccgtcgtcttcgacggcccagcgagtccaccacgtctaccccgcgctccccaccccactt
ttgcgaccttctcggaggccgccccaccgagattgtgggcctttatccagtcggtttgtt
ataacaccccgaagacgatatcccattcagcaagcccagtattccttgctgggggcactt
ccaaccgtatgctggaatggtggccataagaaagccgtgctatctgcacggaactcgagg
atggtgtgcagcccagtgacagtgaggattgcccctccagatagcaagctatttcgatca
ccaatgccggagcagatactcagcaccacactgtcttcaccatcaagtaatgccccagac
ccttgtgcaaaggagacggtgctgaatgccctcaaggaaaagaagaaaaggacagtggca
gaggaagaccagctgcatcttgatggccaggaaaacaagagaagacgccacgatagcagt
gggagtggacattcggcattcgagccccttgtggccaacggagtccctgctgcatttgtg
cctaagcctggctccctgaagagaagtctggcttcccagagctcggatgaccacttgaac
aaacggtctcgcacctcctctgtgagctccctgactagcacatgcacaggaggcatcccc
agctccagccgcaacgccatcaccagctcctacagctccacccgaggtgtctcacagctg
tggaagaggagtggtcccacctcttctcccttctccagcccagcttcctcccgctcccag
acaccagagaggccagccaagaagacaagagaggaggaaccatgtcaccagtccagttct
tcagctcccttggtgacagacaaggagtccccaggagaaaaggttacagatccagccacg
gggaagcagcagagcctgtggacttccccacccacacctggcagctccgggcaacgcaaa
cgcaagattcagctgctgccctcccggcgaggggaccagctcaccttgcctccaccccct
gagcttggctattccatcactgctgaagacctggacatggagaggagagcctcactgcag
tggtttaacaaggtcttggaggataagacggatgatgcctctaccccagccactgacacc
tccccagccaccagccctcccttcacactcaccctgcctaccgtggggcctgctgcctca
ccagcctccctcccagctcccagctctaacccactgttggagagtttgaagaagatgcag
gagtctccagccccatcctcctcagaacctcctgaggcagcaacagttgcggccccttca
cctccgaagacacctagcctcctggcccctcttgtctcaccactgacagggcccctagcc
agcacctcctcagactccaaacctacaaccaccttcctggggctggcttctgcttcatcc
gccacaccactcactgacaccaaggcccctggagtctctcaggcccagctgtgtgtcagc
accccagccgccacagctccctccccaactccagccagcacgctgttcgggatgctgagt
ccacctgccagctcctcttcccttgccactcctggcccagcttgcgcttctcccatgttt
aagcccattttcccggccacacctaagagtgagagtgataatcccttgccaactagctcc
tcagccgccacgacaactccagccagcaccgccctccccacaacagcaaccgccacagct
cacactttcaagcccatttttgagagcgtggagccatttgcagccatgcccctgtcacct
cccttctccctgaagcagacaactgctccggccaccactgcagccacatcagctcctctc
ctcactggcctgggcactgccacttccacagtggccactggcaccacagcttctgcctcc
aagcctgtgtttggctttggagtgaccactgcagcgagcactgccagtaccatagcttcc
acctcccagtcacttctgtttgggggagccccgcctgttactgcttccagttccgcccca
gccctggcctccatcttccaatttggcaagccccttgccccagcagcgtctgtggcgggc
acctcctttagccagtcccttgccagctctgcccagactgctgccagcaatagtagtggg
ggcttcagtggttttggtgggaccctcaccacctccacctctgcccctgccaccaccagc
cagcccactctgaccttcagcaacactgtcacccccaccttcaacattccctttagcgcc
agtgccaagcctgcgctcccaacctaccccggagccaactcacagcccacatttggagcc
actgatggggccaccaagccggcacttgccccaagttttggcagctctttcacttttggc
aactctgtggcctcagccccgtcggcagccccagcaccagccgcctttggtggtgctgca
cagccagctttcggagggttgaaagcctcagcctccaccttcggcacccctgccagcact
cagccggctttcggtagcaccacttccgtgttctcctttggttcagccaccacatctggc
tttggtgctgctgccgccaccacacagaccacccacagtgggagcagcagctctctgttt
ggcagctctactccatccccattcacattcggtggctcagcagctcctgctggtggtgga
ggctttgggcttagtgctacaccaggtaccggctccacctctggaacttttagctttgga
tctggacagagcgggaccacgggcaccaccacctcctttgggggaagtctgagtcagaac
accctgggcgcacctagccagagctcaccgttcgccttcagtgtgggcagtacacctgaa
agcaagcctgtgtttggaggcacatccacacctacttttgggcagagtgcccctgcccca
ggagtcggcaccacaggcagcagcctctcatttggggccccttcaacacctgcccaaggc
tttgttggagttggacctttcggatcaggagccccttccttttccattggcgcgggatcc
aagaccccaggggctcgacagcgacttcaggcccgaaggcagcacacccgcaagaagtag

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