KEGG   Rattus norvegicus (rat): 114206
Entry
114206            CDS       T01003                                 
Symbol
Tmf1
Name
(RefSeq) TATA element modulatory factor
  KO
K20286  TATA element modulatory factor
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    114206 (Tmf1)
Membrane trafficking [BR:rno04131]
 Endosome - Golgi transport
  Rab GTPases and associated proteins
   Rab associated proteins
    114206 (Tmf1)
SSDB
Motif
Pfam: TMF_TATA_bd TMF_DNA_bd ATG16 SlyX
Other DBs
NCBI-GeneID: 114206
NCBI-ProteinID: NP_446123
RGD: 620551
Ensembl: ENSRNOG00000056462
UniProt: A0A0G2JZ48 A6IBF4 Q9QYA5
Position
4:complement(131316630..131345666)
AA seq 1093 aa
MSWFNASQLSSFAKQALSQAQKSIDRVLDIQEEEPSAWAEAIPYGEPGISPSVSGGWDTS
TWGLNSSSEPQSSPTASQAITKPVRRTVVDESENFFSAFLSPSDVQTIQKSPVVSKPPAK
SQRPEEEVKSSLQEPSSPGQSRTSETAESEATDSACVSGETPAVGTPSPVPEGKREETAS
EESEGKVPTVRAKASESVVKVNTAEDVSPTSTQSLTTETKDMALEPKEQKHEDRQSNTPS
PPVSSFSSGTSTTSDIEVLDHESVISESSASSRQETSDAKSSLHLMQTSFQLLSASACPE
YGRLDDFQKLSESCCSSDAFERIDSFSVQSLDSRSVSEINSDDELPGRGYALVPIVVSPS
APKTKVVESTEENVEEEEGNETLIAPSEEAELEESGRSATPVNCDQPDTLASPTPVNVGP
SASGPAAEDGEAAENHPKAPQLEQEDVGKTVEFLNEKLEKRETQLLSLSKEKALLEEAYD
NLKDEMFRVKEESSSISSLKDEFTQRIAEAERKAQLACKERDTAKKEMKTMKEELASRLN
SSQTADLLKEKDEQIQGLMEEGEKLSKQQLHNSNMIKKLRAKDKDNESVIAKLKKKAKEL
EEELQHLRQVLDGKEEVEKQHRENIKKLNSVVERQEKDLGRLQVDMNELEEKSRSTQAAL
DSAYRELTDLHKANAAKDSEVQEAALRREMKAKEELSGALEKAQEEARQQQETLALQVGD
LRLALQRAEQAAARKEDYLRHEISELQQRLQEAENRNQELSQSVSSTTRPLLRQIENLQA
TLGSQTSSWEMLEKNLSDRLGESQTLLAAAVERERAATEELLANKIQMSSVESQNALLRQ
ENSRLQAQLESEKNKLRKLEDENSRYQVELENLKDEYVRTLEEARKEKTLLSSQLEMERM
KVEQERKKTIFTQETLKEKEHKPFSVSSTPTMSRSSSLSGVDMAGLQTSFLSQDESHDHS
FGPMSTSASGSNLYEAVRMGAGSSIIENLQSQLKLREGEISHLQLEISNLEKTRSIMSEE
LVKLTNQNDELEEKVKEIPKLRVQLRDLDQRYNTILQMYGEKAEEAEELRLDLEDVKNMY
KTQIDELLRQRLS
NT seq 3282 nt   +upstreamnt  +downstreamnt
atgagctggttcaatgcctcgcagttgtccagcttcgccaagcaggccctgtcccaggcc
cagaagtccatcgacagggtcctggacatccaggaggaagagccgagcgcctgggccgag
gccatcccgtacggtgagccaggaataagtccctctgtgagtggaggatgggatacttca
acctggggattgaactcaagctctgaacctcagagttcaccaacagcctctcaagcaatt
acaaagccagttcggaggactgtagtagatgaatctgaaaatttcttcagtgcctttctc
tctccatcggatgtgcagaccattcagaagagtccagtggtctcaaagcctcctgctaaa
tcacagcgaccagaagaagaagtgaaaagcagtttacaagaaccatcgtctcctggccag
tccagaacctctgagacagcggagtctgaagcgacagactctgcctgtgtttcgggagag
actccagccgtgggcactccctcacctgtccctgaaggcaagcgtgaagaaactgctagt
gaagagtctgaggggaaggtgcccaccgtgagagcgaaggcgtctgaaagcgtagttaag
gtaaacacagcagaagatgtatctcccacatccactcagtctcttacgaccgaaacgaag
gatatggctttggagcctaaagaacaaaaacacgaagacagacaaagcaacacaccttct
cctcctgttagctccttctcgtcaggcacttccaccaccagtgacattgaagttttagat
catgaaagtgtaataagtgagagctcagctagttcaaggcaagagacttcagatgcaaag
tcaagtcttcacctcatgcagacctcatttcagcttctctctgcatctgcttgtcctgag
tatggccgcttagatgacttccaaaagctcagtgagagttgctgctcttcggatgctttt
gagagaatagactcgtttagcgtgcagtctctggatagccggagtgtgagtgaaatcaac
tcggacgacgaactgccgggtagaggctatgctttagtacctatagtcgtgagtccttca
gccccgaagacaaaagtagtagaatctactgaggaaaacgttgaagaagaggaaggaaac
gagacattaattgcaccttctgaggaagcagaattagaggaaagtggccgaagtgctact
ccagttaactgtgaccagccagatacattggcttctcctacaccagtaaatgttgggccc
tctgcctctggaccggccgctgaggatggtgaagctgctgaaaaccacccaaaagcacca
cagctggagcaagaagatgttggcaagacagttgaatttctgaatgagaagctagaaaag
agggagactcaattattgtcacttagtaaggaaaaggcacttctagaggaagcttatgat
aacctgaaggatgaaatgttcagagtaaaagaagaaagtagtagcatttcttccctgaaa
gatgagtttacccagaggatcgcagaagcagaaaggaaagctcaactcgcctgcaaagag
agagacactgcgaagaaggaaatgaaaaccatgaaggaagaacttgcctctagattaaat
agtagtcagactgcagaccttctgaaggaaaaggatgaacagattcaaggcttaatggaa
gaaggagaaaaactttcgaagcagcagctgcataattccaacatgattaagaaattaaga
gctaaggataaagacaatgaaagtgttattgcaaagctgaagaaaaaagctaaggagctg
gaagaggagctacagcatttaagacaggtccttgatggcaaagaagaggttgagaaacaa
catagagaaaacattaaaaaactaaattctgtagtagaacgccaggaaaaagatcttggc
cgacttcaggtagacatgaatgaacttgaagaaaagagccgaagtactcaggctgcccta
gacagtgcctacagagaacttactgatcttcacaaagccaacgctgctaaggacagtgag
gtacaagaagctgctctgaggcgtgagatgaaagctaaagaagaactttctggggcactg
gagaaggcccaggaagaagcccgtcagcagcaagagactttagcacttcaggttggggac
cttaggctagcgctgcaacgggcagagcaagcagctgccaggaaagaggattacttacgc
catgagatcagtgaacttcagcagagactccaagaagcagagaatcgaaaccaggagctg
agtcaaagtgtttcatcaacaacaagacctttgcttcgacagatagaaaatttacaagca
actctaggatcccagacatcgtcatgggagatgctagagaagaatctttctgatcggctc
ggtgaatcacagaccttgttggctgcagcagttgaaagagaacgtgcagctacggaagaa
ctcctagccaacaaaatccagatgtcttcagtggagtcgcagaatgcattactacgacag
gaaaacagtagactgcaggcccagctagagtcagagaaaaataaattaagaaaactagag
gatgaaaatagccggtaccaggttgaattagaaaatctaaaagatgaatatgtaagaaca
cttgaagaggcaaggaaagaaaagacacttttgagcagtcagttagaaatggaaagaatg
aaagttgaacaagaaaggaagaaaaccattttcactcaagaaacactaaaagaaaaggag
cacaagccgttttccgtttctagtactcccaccatgtcacgatccagttctctaagtgga
gtagatatggcagggctgcagacatccttcctatctcaggatgagtctcacgaccattca
tttgggccaatgtctacgtcagccagtggaagcaatctttatgaagctgtaaggatggga
gccggatcaagcattatcgaaaatcttcagtctcagctaaagctgagggaaggagaaatt
agtcatttacagctagaaattagtaacctagaaaaaactcgatccataatgtccgaagag
ctagttaaattaacaaatcagaatgatgaacttgaggagaaagtgaaagagatacccaag
cttcgagttcagctgcgagatttggatcaaagatacaacactattctgcagatgtatgga
gaaaaagcagaagaagcagaggaacttcgcctggatcttgaagatgtaaaaaatatgtat
aaaactcaaatagatgaacttctaagacaaagactcagctaa

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