KEGG   Rattus norvegicus (rat): 114217
Entry
114217            CDS       T01003                                 
Symbol
Yme1l1
Name
(RefSeq) ATP-dependent zinc metalloprotease YME1L1
  KO
K08955  ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rno01002]
    114217 (Yme1l1)
Peptidases and inhibitors [BR:rno01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   114217 (Yme1l1)
SSDB
Motif
Pfam: Peptidase_M41 AAA AAA_lid_3 AAA_16 TIP49 AAA_5 AAA_22 RuvB_N AAA_17 DUF815 Mg_chelatase IstB_IS21 AAA_14 AAA_33 FumaraseC_C AAA_28 Zeta_toxin nSTAND3 AAA_18 PhoH AAA_7 AAA_25
Other DBs
NCBI-GeneID: 114217
NCBI-ProteinID: NP_446134
RGD: 620764
Ensembl: ENSRNOG00000055012
UniProt: Q66HP7
Position
17:90195485..90235675
AA seq 715 aa
MFSLSSTVQPQVTVPLSHLINAFHSPKNISVSVNTSASPKQHRDTVAEHEAPSSEPVLNL
RDLGLSELKIGQTDKLVENLLPGFYKDKRVSSCWHTSHISAQSFFENKYGHLDMFSTLRS
SSLYRQHPKTLQSICSDLQNFPVFIQSRGFKTLKSRTRRLQSTSERLAEAQNIAPSFVKG
FLLRDRGTDLESLDKLMKTKNIPEVHQDAFKTGFAEGFLKAQALTQKTNDSLRRTRLILF
VLLLFGIYGLLKNPFLSVRFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFL
KNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGAS
RIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVII
IGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGT
VGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAY
HESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGR
VAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTGKLSPETQSAIE
QEIRILLRESYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVLEGKKLEVR
NT seq 2148 nt   +upstreamnt  +downstreamnt
atgttctccctgtcgagcactgtgcagcctcaggttacagttcctctcagtcatctcatc
aatgccttccattcaccaaaaaatatatccgtttccgtcaatacatctgcttctccaaaa
cagcatcgagatacagttgctgagcatgaagctcccagtagtgagcctgtgcttaattta
agggaccttggattatctgaattgaaaattggacagactgataaactggtagaaaattta
cttcctggattttataaagacaaaagagtttcttcctgttggcatacatctcatatctcg
gcacagtccttttttgaaaataaatatggtcacttagatatgttcagtacattacgttcc
tctagcttgtacaggcaacatccaaaaactcttcagagcatttgttcagatcttcagaat
tttccagttttcatacagtctcgtggtttcaaaactttgaagtcaaggacacggcgtttg
caatctacttctgaaagattagcagaagcacagaatatagcaccatcatttgtgaagggg
tttcttttgcgggacagaggaacagatcttgagagtttggacaaacttatgaaaactaaa
aacatacctgaagttcaccaagatgcatttaaaactggttttgcagagggttttctcaaa
gctcaagctcttacacagaagaccaatgattccttaaggcgaactcgtctgattctcttt
gttttgctcctgtttggcatttatggactcttaaaaaatccatttttatctgtgcgcttc
cggacaactacaggacttgattctgcagtagaccctgtccagatgaaaaatgtcactttt
gaacatgttaaaggggtggaggaggccaaacaagaattacaggaagtggttgaattcttg
aaaaacccacagaagtttactgtgcttggaggtaaacttcccaaaggaattctcttagtg
gggccaccaggaacagggaagacccttcttgcccgagctgtggcaggagaagctgatgtt
cctttttattatgcttctggatcagaattcgatgagatgtttgtgggtgtaggagccagc
aggatcagaaatctttttagagaagcaaaagcaaatgctccttgtgttatattcattgat
gaattggattctgttggtgggaagagaattgaatctccaatgcatccatattcaaggcag
actatcaatcaacttcttgccgaaatggatggtttcaaacctaatgaaggagtaatcatt
ataggtgccacaaatttcccagaggcattagataatgccttaatacgtcctggtcgtttt
gatatgcaagttacagttccaaggccagatgtgaagggtcgtactgaaattttgaaatgg
tatcttaataaaataaagtttgataaatctgttgatccagaaatcatagctcgaggaact
gttgggttttctggagcagagttggagaatcttgtgaaccaagctgcattaaaggcagca
gttgatggaaaagaaatggttaccatgaaggaactagagttttccaaggataaaattcta
atgggaccagaaagaagaagtgtggaaattgataacaaaaacaaaactataacagcctat
catgaatctggtcatgctattattgcatattacacaaaggatgcaatgccaatcaataaa
gctacaatcatgccacgagggcccacacttggacatgtatcactgttgcctgagaatgac
agatggaatgaaactagagcccagctgcttgcacagatggatgttagtatgggaggaaga
gtggcagaggaactcatatttggaaccgatcatattacaactggtgcttctagtgatttt
gataatgcaacaaaaattgcaaagaggatggttaccaaatttggaatgagtgaaaagctt
ggagttatgacctacagtgatacaggaaagctaagtcctgaaactcaatcggccattgaa
caagaaataagaatccttctacgggaatcatatgaacgagcaaaacatatcctgaaaaca
catgcgaaagaacataagaacctggccgaggcgttgctgacctatgagactttggatgcc
aaagagattcaaattgttcttgaggggaagaaattagaagtgagatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (22)   
   Pfam (22)   
All databases (40)   

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