KEGG   Rattus norvegicus (rat): 114493
Entry
114493            CDS       T01003                                 
Symbol
Cacna1f
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1F
  KO
K04853  voltage-dependent calcium channel L type alpha-1F
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04010  MAPK signaling pathway
rno04020  Calcium signaling pathway
rno04022  cGMP-PKG signaling pathway
rno04024  cAMP signaling pathway
rno04260  Cardiac muscle contraction
rno04261  Adrenergic signaling in cardiomyocytes
rno04270  Vascular smooth muscle contraction
rno04723  Retrograde endocannabinoid signaling
rno04725  Cholinergic synapse
rno04726  Serotonergic synapse
rno04727  GABAergic synapse
rno04911  Insulin secretion
rno04912  GnRH signaling pathway
rno04921  Oxytocin signaling pathway
rno04924  Renin secretion
rno04925  Aldosterone synthesis and secretion
rno04927  Cortisol synthesis and secretion
rno04929  GnRH secretion
rno04934  Cushing syndrome
rno04935  Growth hormone synthesis, secretion and action
rno05010  Alzheimer disease
rno05020  Prion disease
rno05022  Pathways of neurodegeneration - multiple diseases
rno05207  Chemical carcinogenesis - receptor activation
rno05410  Hypertrophic cardiomyopathy
rno05412  Arrhythmogenic right ventricular cardiomyopathy
rno05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    114493 (Cacna1f)
   04020 Calcium signaling pathway
    114493 (Cacna1f)
   04024 cAMP signaling pathway
    114493 (Cacna1f)
   04022 cGMP-PKG signaling pathway
    114493 (Cacna1f)
 09150 Organismal Systems
  09152 Endocrine system
   04911 Insulin secretion
    114493 (Cacna1f)
   04929 GnRH secretion
    114493 (Cacna1f)
   04912 GnRH signaling pathway
    114493 (Cacna1f)
   04921 Oxytocin signaling pathway
    114493 (Cacna1f)
   04935 Growth hormone synthesis, secretion and action
    114493 (Cacna1f)
   04924 Renin secretion
    114493 (Cacna1f)
   04925 Aldosterone synthesis and secretion
    114493 (Cacna1f)
   04927 Cortisol synthesis and secretion
    114493 (Cacna1f)
  09153 Circulatory system
   04260 Cardiac muscle contraction
    114493 (Cacna1f)
   04261 Adrenergic signaling in cardiomyocytes
    114493 (Cacna1f)
   04270 Vascular smooth muscle contraction
    114493 (Cacna1f)
  09156 Nervous system
   04727 GABAergic synapse
    114493 (Cacna1f)
   04725 Cholinergic synapse
    114493 (Cacna1f)
   04726 Serotonergic synapse
    114493 (Cacna1f)
   04723 Retrograde endocannabinoid signaling
    114493 (Cacna1f)
 09160 Human Diseases
  09161 Cancer: overview
   05207 Chemical carcinogenesis - receptor activation
    114493 (Cacna1f)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    114493 (Cacna1f)
   05020 Prion disease
    114493 (Cacna1f)
   05022 Pathways of neurodegeneration - multiple diseases
    114493 (Cacna1f)
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    114493 (Cacna1f)
   05412 Arrhythmogenic right ventricular cardiomyopathy
    114493 (Cacna1f)
   05414 Dilated cardiomyopathy
    114493 (Cacna1f)
  09167 Endocrine and metabolic disease
   04934 Cushing syndrome
    114493 (Cacna1f)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    114493 (Cacna1f)
Ion channels [BR:rno04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   114493 (Cacna1f)
SSDB
Motif
Pfam: Ion_trans CAC1F_C Ca_chan_IQ GPHH PKD_channel HemY_N
Other DBs
NCBI-GeneID: 114493
NCBI-ProteinID: NP_446153
RGD: 621535
Ensembl: ENSRNOG00000010348
UniProt: Q923Z7
Position
X:complement(17539992..17568308)
AA seq 1980 aa
MSESEVGKDTTPEPSPANGTGPGPEWGLCPGPPTVGTDTSGASGLGTPRRRTQHNKHKTV
VVASAQRSPRALFCLTLTNPIRRSCISIVEWKPFDILILLTIFANCVALGVYIPFPEDDS
NTANHNLEQVEYVFLVIFTVETVLKIVAYGLVLHPSAYIRNGWNLLDFIIVVVGLFSVLL
EQGPGRPGDAPHTGGKPGGFDVKALRAFRVLRPLRLVSGVPSLHIVLNSIMKALVPLLHI
ALLVLFVIIIYAIIGLELFLGRMHKTCYFLGSDMEAEEDPSPCASSGSGRSCTLNQTECR
GRWPGPNGGITNFDNFFFAMLTVFQCITMEGWTDVLYWMQDAMGYELPWVYFVSLVIFGS
FFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQMEEDLRGYLDWITQAEELDLHDPS
VDGNLASLAEEGRAGHRPQLSELTNRRRGRLRWFSHSTRSTHSTSSHASLPASDTGSITD
TPGDEDEEEGTMASCTLCLNKIMKTKVCRHFRRANRGLRARCRRAVKSNACYWAVLLLVF
LNTLTIASEHHGQPVWLTQTQEYANKVLLCLFTVEMLLKLYGLGPSVYVASFFNRFDCFV
VCGGILETTLVEVGAMQPLGISVLRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASLL
LLLFLFIIIFSLLGMQLFGGKFNFDQTHTKRSTFDTFPQALLTVFQILTGEDWNVVMYDG
IMAYGGPFFPGMLVCVYFIILFICGNYILLNVFLAIAVDNLASGDAGAAKDKGREKSSEG
NPPQENKVLVPGGENEDTEGTKSEGAAPGMEEEEEEEEEEEEENGAGHVELLQEVVPKEK
VVPIPEGSAFFCLSQTNPLRKACHTLIHHHVFTSLILVFIILSSVSLAAEDPIRAHSFRN
HILGYFDYAFTSIFTVEILLKMTVFGAFLHQGSFCRSWFNLLDLLVVSVSLISFGIHSSA
ISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQL
FKGKFYSCTDEAKHTLKECKGSFLIYPDGDVSRPLVRERLWVNSDFNFDNVLSAMMALFT
VSTFEGWPALLYKAIDAHAEDEGPIYNYHVEISVFFIVYIIIIAFFMMNIFVGFVIITFR
AQGEQEYQNCELDKNQRQCVEYALKAQPLRRYIPKNPHQYRVWATVNSAAFEYLMFLLIL
LNTVALAMQHYEQTAPFNYAMDILNMVFTGLFTVEMVLKIIAFKPKHYFADAWNTFDALI
VVGSVVDIAVTEVNNGGHLGESSEDSSRISITFFRLFRVMRLVKLLSKGEGIRTLLWTFI
KSFQALPYVALLIAMIFFIYAVIGMQMFGKVALQDGTQINRNNNFQTFPQAVLLLFRCAT
GEAWQEIMLASLPGNRCDPESDFGPGEEFTCGSNFAIVYFISFFMLCAFLIINLFVAVIM
DNFDYLTRDWSILGPHHLDEFKRIWSEYDPGAKGRIKHLDVVALLRRIQPPLGFGKLCPH
RVACKRLVAMNVPLNSDGTVTFNATLFALVRTSLRIKTEGNLDQANQELRMVIKKIWKRI
KQKLLDEVIPPPDEEEVTVGKFYATFLIQDYFRKFRRRKEKGLLGADAPTSTSSVLQAGL
RSLQDLGPEIRQALTYDTEEEEEEEEAAGQEAEEEEAENNPETYKDSIDSQPQAQWNSRI
SVSLPVKEKLPDSLSTGPSDDDGVAPNSRQPSGLQAGSQPHRRSSGVFMFTIPEEGSTQL
KGVQGQDNQNEEQEVPDWTPNLDEQAGMPSNPVLLPPHWSQQHVNGHHVPRRRLLPPTPA
GRKPSFTIQCLQRQGSCEDLPIPGTYHRGRTSGPGRAQGSWAAPPQKGRLLYAPLLLVEE
STVGEGYLGKLGGPLRTFTCLQVPGAPSDPSHRKRGSADSLVEAVLISEGLGLFAQDPRF
VALAKQEIADACHLTLDEMDSAASDLLAQRTTSLYSDEESILSRFDEEDLGDEMACVHAL
NT seq 5943 nt   +upstreamnt  +downstreamnt
atgtcggaatctgaagtcgggaaagacaccaccccagaacccagtccagccaatgggacc
ggtcctggccctgagtgggggctctgtcctgggcctccaaccgtggggactgataccagt
ggggcatcgggcctggggaccccaagacggaggactcagcacaacaagcacaagaccgta
gtggtggccagtgcgcagagatcacctcgagcactcttctgcctcaccttaaccaatccc
attcgtcggtcctgcatcagcattgtggagtggaagccatttgatattctcatcctcctg
accatctttgccaactgtgtggcattgggggtatatatccccttccctgaggacgactcc
aacactgctaaccacaacttggaacaggtagaatatgtgttcctggtgattttcaccgtg
gagacagtgctcaagatcgtggcctatgggctggtgctccatcccagcgcctacattcgc
aatggttggaacctactcgacttcatcatcgttgtagtcgggctgttcagcgtgttgctg
gagcagggacctgggcggccaggagatgccccgcatactggaggaaagccgggaggcttt
gatgtaaaggcactgcgggcatttagggtgctacgaccactaaggctagtgtctggggtc
ccgagtctgcacatagtgctcaattccatcatgaaggcgcttgtgccgcttctgcacatt
gccctgttggtgctcttcgtcattatcatttacgccatcatcggactcgagctgttcctc
ggacgaatgcacaagacgtgctacttcctgggatctgatatggaggcagaggaggacccg
tcgccttgtgcatcttctggctctggccgttcatgcacactgaaccagactgagtgccgt
gggcgctggccaggacccaacggtggcatcacgaactttgacaattttttctttgccatg
ctaactgtgttccagtgtattaccatggaaggctggacagacgtcctctactggatgcag
gatgccatggggtatgagctaccttgggtgtactttgtgagcctcgtcatctttgggtct
ttctttgtcctcaaccttgtgcttggagtcctaagtggggagttctccaaggaaagagaa
aaggcaaaagcccgaggtgactttcagaagcttcgggagaagcagcagatggaagaggac
cttcggggctacctggactggatcacacaggctgaggagttggaccttcatgacccctca
gtagacggcaacttggcttctcttgctgaagagggacgggcaggccatcgaccacaactg
tcagagctgaccaataggaggcgcggacgactgcgttggttcagccactccactcgctcc
acacactccaccagcagtcatgccagccttccagccagtgacactggttccataacagac
acccccggagatgaggatgaagaggaggggaccatggccagctgtacactctgcctaaac
aagattatgaaaaccaaggtctgccgccacttccgccgagccaaccgtggtctccgtgca
cgctgccgccgggcagtcaagtccaatgcctgctactgggctgtattgctgctcgtcttc
ctcaacacgttgaccatcgcttctgagcaccatgggcagccagtgtggctcacccagacc
caagaatatgccaacaaggttctgctctgcctcttcaccgtggagatgcttctcaaactg
tacggcctgggcccctctgtctacgttgcctcttttttcaaccgctttgactgtttcgtg
gtctgtgggggcatcctagaaacgacgttggtggaggtgggggccatgcagcccctcggc
atctcagtgctccgatgtgtgcgtctcctcaggatcttcaaggtcaccaggcactgggca
tccctcagcaatctggtggcatcgctgctcaactccatgaagtccatcgcctccttgctg
cttctcctctttctctttatcatcatcttctcccttcttggcatgcagctgtttgggggc
aagttcaactttgaccagacccacactaagagaagcacctttgataccttcccccaagcc
ctcctcaccgtctttcagatcctgactggtgaggattggaatgtagtcatgtatgacggt
atcatggcctacggtggtcccttcttcccagggatgctggtgtgtgtttatttcatcatc
ctcttcatctgtggcaactacatcctactgaacgtgtttcttgccattgctgtggataac
ctagccagcggggatgcgggtgctgccaaagataagggcagagagaagagcagtgaagga
aaccctccccaagagaacaaagtattggtgcctggtggagaaaatgaggacacagagggc
acaaaaagtgaaggagcagcaccaggcatggaggaagaggaggaagaagaggaggaggag
gaggaagaaaatggtgcaggacatgtggaactcctgcaggaagttgtacccaaggagaag
gtggtacccatccctgaaggcagtgccttcttctgcctcagccaaaccaacccgcttcgc
aaggcctgccacactctcatacaccatcacgtgttcaccagtctcatcctggtgttcatc
atcctcagtagtgtgtccctggctgctgaggaccccatcagagcccactccttccgcaac
catattctggggtacttcgattatgccttcacttccattttcaccgtggagattctatta
aagatgacggtgtttggggctttcctgcaccaaggttctttctgccgtagctggttcaat
ctgttggatctgcttgtggtcagtgtgtccctcatctcctttggcatccactccagtgcc
atctcagttgtgaagattctccgagtcctccgagtcctgcggcctctccgagccattaac
cgagccaagggactcaagcatgtggtgcagtgtgtgtttgtggccatccggaccattgga
aacatcatgattgtcaccaccctcttgcagttcatgttcgcctgcattggtgttcagctg
ttcaagggaaaattctacagttgcactgatgaagccaaacacaccctgaaagaatgcaag
ggctccttcctcatctaccctgatggagatgtgtcacgacctttggtccgggaacgcctc
tgggtcaacagtgatttcaactttgacaacgtcctttcagccatgatggccctgttcact
gtctctacctttgaaggctggcctgcgctactatacaaagccatagatgcacacgctgaa
gacgagggccctatctacaattaccatgtggagatatcagtattcttcattgtctacatc
atcatcatcgccttcttcatgatgaacatctttgtgggatttgtcatcatcacattccgt
gcccagggagagcaggaatatcaaaactgtgaactggacaagaaccagcgccagtgtgtg
gaatatgcactcaaagctcagccactccgccgatacatccccaagaatccacatcagtac
cgcgtgtgggccacagtgaactcagccgcctttgagtacctcatgtttctgctcatcctc
ctcaacacagttgccctggccatgcagcactatgagcagacggctccctttaactatgcc
atggacatactcaacatggtcttcactggcctcttcaccgttgagatggtgctcaaaatc
attgcctttaaacccaagcattactttgccgatgcctggaatacattcgatgctcttatt
gtagtgggcagcgtagtcgacattgccgtcacagaagtcaataatggaggccatcttggt
gagagctcagaggacagctcccgcatatctatcacgttctttcgcctcttccgggtcatg
aggctggtgaagctgctcagtaagggtgaggggatccgcacactgctctggacattcatc
aagtctttccaggccttgccctatgtggcacttcttatagcaatgatattcttcatatat
gcagtcattggcatgcagatgtttggcaaagtggctcttcaggacggcacacagataaat
cgaaacaataatttccagacctttccgcaggctgtgctgcttctgttcaggtgtgccact
ggtgaggcatggcaagagataatgctagccagccttccaggaaatcggtgtgaccctgag
tctgactttggcccaggcgaggaatttacctgtggtagcaattttgccattgtctacttt
atcagcttcttcatgctctgtgccttcctgattataaatctctttgtggctgtaatcatg
gataactttgattacctaaccagagattggtctattctgggaccccaccacctcgatgaa
ttcaagaggatctggtctgaatatgaccccggagccaagggccgcatcaagcacttggat
gtggttgccctgctgagacgcatccagcctccactgggatttggaaagctgtgcccacac
cgagtggcctgcaagagactggtggccatgaatgttcccctcaactcagacggaacagtg
acattcaacgcgacactctttgccctggtgcggacatccctgaggatcaagacagaaggg
aacctggatcaagccaaccaggagcttcggatggtcatcaaaaagatctggaagcggata
aagcagaaattgttagatgaggtcatcccccctccagatgaggaggaggtcactgtggga
aaattctatgccacatttctcatccaagattatttccgaaaattccggagaaggaaagaa
aaggggctactaggagcagatgccccaacaagcacatcctctgtcctccaggctggtcta
aggagcctacaggacttgggtcctgagatccgacaggccctcacctatgacactgaggaa
gaagaagaagaagaagaggccgcaggtcaggaagctgaggaggaggaagctgagaacaac
ccagaaacatacaaagactccatagactcccagccccaagctcaatggaactcgaggatt
tcggtgtctctaccagttaaggagaaactcccagattctctttcaactgggcctagtgat
gatgatggagtggctcccaactccaggcaacccagtgggctacaggctggatcccaaccc
cacaggagaagctctggggttttcatgttcactatcccagaagaaggaagtactcagctc
aagggagttcaagggcaagacaatcagaatgaggaacaggaagtccctgactggaccccc
aacctggatgagcaggcagggatgccctccaacccagtccttttaccacctcactggtcc
cagcaacatgtaaatgggcaccatgtaccacgccgacgtttgctaccccccacgcctgca
ggtcggaagccctccttcaccatccagtgtctgcaacgccagggcagttgtgaggatttg
cccatcccaggcacctaccatcgtggacggacctcaggaccaggcagggctcagggttcc
tgggcagcccctcctcagaagggtcgactgctctatgcccccctgttgctggtggaggaa
tctacagtgggtgaaggataccttggcaagctcggcggcccactgcgtaccttcacttgt
ctgcaagtgcctggagctccttcagatcccagtcaccgcaagaggggcagtgctgacagt
ttggtggaggctgtgcttatctccgaaggcctaggcctctttgcccaagacccacgattt
gtggccctggccaagcaagagattgcagatgcatgtcacctgaccctggatgagatggac
agtgctgccagtgacctgctggcacagagaaccacctccctttacagtgacgaggagtct
attctctcccgctttgatgaagaggacctgggagatgagatggcctgtgtccatgccctc
taa

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