KEGG   Rattus norvegicus (rat): 114521
Entry
114521            CDS       T01003                                 
Symbol
Tdg
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform 1
  KO
K20813  thymine-DNA glycosylase [EC:3.2.2.29]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    114521 (Tdg)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    114521 (Tdg)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.29  thymine-DNA glycosylase
     114521 (Tdg)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     114521 (Tdg)
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-GeneID: 114521
NCBI-ProteinID: NP_001375432
RGD: 620959
Ensembl: ENSRNOG00000027124
Vega: OTTRNOG00000001133
Position
7:complement(22965388..22990311)
AA seq 410 aa
MDAEAARSYSLEQVQALYSFPFQQMMAEAPNMADVAGQQMPAEAPAQDPVPEAPKRRKRK
TRAAEAQDPVEPKKPAASKKSGKSTKSKEKQEKITDTFKVKRKVDRFNGVSEAELLTKTL
PDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLPGK
YGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFG
VKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGIER
STDVQEVQYTFDLQLAQEDAKRTAVKEEKYDPGYEAAYGGACGENPCNGEPCGFASNGLT
ANSAELGGESAPSDVPNGQWMAQSFAEQIPSFNNCGTGEQEAGSHAGSHA
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggacgcggaggccgcgcgcagctactctctggagcaagttcaagctctgtattcattt
ccattccaacaaatgatggcggaggctccgaacatggcagacgtggccggacagcagatg
cctgcagaagctcctgcccaggatcctgtgccagaggctccaaagagaaggaaaaggaaa
accagggcagcagaggcccaggacccagtggagcccaaaaagcctgctgcctcaaagaaa
tctggcaagtccacaaaatcaaaagaaaagcaagagaaaatcacagacacctttaaagtg
aaaaggaaagtggaccggttcaacggtgtctctgaagctgagcttctgaccaagactctc
cctgacattttgaccttcaatctggatattgtaattattggcatcaacccaggattaatg
gccgcttacaaagggcatcattaccctgggcccggaaatcacttctggaagtgtctgttc
atgtctgggttgagcgaggtgcagctgaatcacatggatgaccacaccttacctggaaaa
tacggcatcggattcaccaacatggtggaacggacaacgccaggcagcaaggatctgtct
agtaaagaattccgggaaggagggcgtatcctagtgcagaaactacagaaatatcagcca
cgaatagcggtgtttaatggaaaatgtatttatgagattttcagtaaagaagtttttgga
gtaaaggttaagaacttggaatttgggcttcaaccgcacaagatcccagacacagaaact
ctctgctacgtcatgccgtcctccagtgcccggtgcgctcagttccctcgggcgcaggac
aaagtccattactacattaagctgaaggacttgcgagaccagctgaagggcatcgagcgc
agcacggacgttcaggaggtgcagtacacgttcgacctgcagctcgcacaagaggacgca
aagaggacggctgttaaggaagaaaagtatgacccaggctatgaggcagcgtatggcggt
gcctgtggtgaaaacccgtgtaatggggaaccttgtggctttgcttcaaatgggctaaca
gccaacagtgcggagctgggaggagaatcagctccgagcgacgttccaaacgggcagtgg
atggcgcagtcgtttgcagagcagatcccttctttcaataattgtggcacaggagagcag
gaagcaggaagccatgcaggaagccatgcttag

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