KEGG   Rattus norvegicus (rat): 114598
Entry
114598            CDS       T01003                                 
Symbol
Clec4f
Name
(RefSeq) C-type lectin domain family 4 member F
  KO
K10060  C-type lectin domain family 4 member F
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:rno04091]
    114598 (Clec4f)
Lectins [BR:rno04091]
 C-Type lectins
  Group 2: Type II membrane receptors (Asialoglycprotien and DC receptors)
   Largerin and kupffer cell receptors
    114598 (Clec4f)
SSDB
Motif
Pfam: Lectin_C HMMR_N Phage_GP20 Fez1 CENP-F_leu_zip TPR_MLP1_2 AAA_13 Crescentin GAS MscS_porin DUF2730 LPP TolA_bind_tri DUF1664 WEMBL Filament Lebercilin DUF4201 Tropomyosin HIP1_clath_bdg DASH_Duo1 CC149 RPW8 Laminin_II NPV_P10 Fib_alpha Med9 Lectin_N ADIP DUF5798 SKA1 CALCOCO1 Seryl_tRNA_N ERM_helical DUF6511 AIP3 CC2-LZ CEP63 Bacillus_HBL APG6_N MAD Spectrin DUF2203 COG6_N CCDC144C PMP22_Claudin CCDC-167 TMF_TATA_bd YabA CCDC22_CC Sec3_CC DUF4200 FUSC Cnn_1N
Other DBs
NCBI-GeneID: 114598
NCBI-ProteinID: NP_446205
RGD: 621062
Ensembl: ENSRNOG00000013137
UniProt: P10716 A6IAN7
Position
4:complement(117686686..117696407)
AA seq 550 aa
MKEAELNRDVAKFCTDNQCVILQPQGLGPKSAAPMAPRTLRHVQAIVALVVVTVFFSLLA
LFVVVLQPWRQKQNEDHPVKAGLHGGNYSGSDNCSQFVRRAEMQEAIQSLRASGNSSSCH
KEIQTLKYQMDNVSSQVQLLGGHLEEANADIQQAKDVLKGTGALASETQALRSSLEVASA
DIHSLRGDLEKANAMTSQTQGLLKSSTDNTSAELHVLGRGLEEAQSEIQALRGSLQSSND
LGSRTQNFLQHSMDNISAEIQAMRDGMQRAGEEMTSLKKDLETLTAQIQNANGHLEQTDT
QIQGLKAQLKSTSSLNSQIEVVNGKLKDSSRELQTLRRDLSDVSALKSNVQMLQSNLQKA
KAEVQSLKTGLEATKTLAAKIQGQQSDLEALQKAVAAHTQGQKTQNQVLQLIMQDWKYFN
GKFYYFSRDKKSWHEAENFCVSQGAHLASVTSQEEQAFLVQITNAVDHWIGLTDQGTEGN
WRWVDGTPFDYVQSRRFWRKGQPDNWRHGNGEREDCVHLQRMWNDMACGTAYNWVCKKST
DWSVARTDQS
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgaaggaggcggaactgaacagagatgtggctaaattctgcactgacaaccagtgtgtc
atcctacagccccaaggactggggcctaagtcagctgctcccatggctcccaggacactg
aggcacgtccaggccattgtggcactagtggtggtgactgtgttcttctctctccttgct
ctttttgtggtggttttacagccttggagacagaagcagaatgaggatcatcctgtcaaa
gccgggcttcatggaggcaactactctggatctgacaattgttcccaatttgtccggagg
gcagaaatgcaagaggctatccagagtctcagggcctctgggaattctagcagctgtcac
aaggagatacagaccctgaagtaccagatggacaatgttagttctcaggtgcagttgctt
gggggccatctggaggaagccaatgctgacatccagcaggcaaaggatgtgctgaagggc
actggggccttggcctcggagacccaggcactgagaagctccttggaggtcgccagtgcg
gatatccatagtctgagaggcgatttggaaaaggcaaatgccatgacttcccagacccaa
ggtctcttaaagagcagcacagacaacaccagtgctgagctccatgtgctgggcagaggc
ctggaggaagcccagtctgagatccaggctttgaggggaagtctgcagagttcaaatgac
ctcggctcccggactcagaactttctccagcacagtatggacaacattagtgctgaaatc
caggccatgagagatggtatgcaaagagctggcgaggagatgacctcattaaagaaagat
ctagaaacacttactgctcagattcaaaatgcaaatggccacctggagcagacagatacc
cagatccaggggctaaaagctcagttgaaaagcaccagttccttgaactcccagattgag
gtggtcaatggcaaattgaaagactccagcagagagttacagacactgagaagggacctg
agtgatgtctcagctttgaagtccaacgtccagatgttacagagcaatcttcagaaggcc
aaggcagaggtacagagtttgaaaacaggtctggaggctaccaaaactctcgctgccaag
attcagggacaacagagtgacctggaggccctgcagaaagctgtggctgcacacacgcag
gggcagaagactcagaatcaggttctccagctgatcatgcaggactggaagtacttcaat
ggaaagttttattacttttctcgtgacaagaagtcatggcatgaggccgagaatttctgt
gtgtcccagggagcacacctggcttcggtgacctctcaggaggagcaggcattcctggta
cagatcacaaatgctgtggaccattggattgggctcactgatcagggcacagagggcaac
tggcgctgggtggatgggacaccattcgattatgtccagagcagaaggttttggaggaaa
ggccagcctgacaactggagacacggaaacggagagcgtgaagactgtgttcatctgcag
cggatgtggaacgacatggcctgtgggaccgcctacaactgggtgtgcaagaagtctaca
gattggtctgtggccagaacggaccagagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (54)   
   Pfam (54)   
All databases (72)   

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