KEGG   Rattus norvegicus (rat): 114628
Entry
114628            CDS       T01003                                 
Symbol
Abcg5
Name
(RefSeq) ATP-binding cassette sub-family G member 5
  KO
K05683  ATP-binding cassette, subfamily G (WHITE), member 5 (sterolin 1)
Organism
rno  Rattus norvegicus (rat)
Pathway
rno02010  ABC transporters
rno04975  Fat digestion and absorption
rno04976  Bile secretion
rno04979  Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    114628 (Abcg5)
 09150 Organismal Systems
  09154 Digestive system
   04976 Bile secretion
    114628 (Abcg5)
   04975 Fat digestion and absorption
    114628 (Abcg5)
   04979 Cholesterol metabolism
    114628 (Abcg5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rno02000]
    114628 (Abcg5)
Transporters [BR:rno02000]
 ABC transporters, eukaryotic type
  ABCG (White) subfamily
   ABCG5, 8 subgroups
    114628 (Abcg5)
SSDB
Motif
Pfam: ABC_tran ABC2_membrane AAA_21 ABC2_membrane_7 AAA_29 AAA_16 AAA_23 ATP-synt_ab NACHT SMC_N RsgA_GTPase PIF1 AAA_22 AAA_19 AAA_28 AAA_30 MeaB DUF2112 MobB DUF87
Other DBs
NCBI-GeneID: 114628
NCBI-ProteinID: NP_446206
RGD: 620298
Ensembl: ENSRNOG00000005250
UniProt: Q99PE7 A6H9I9
Position
6:15717936..15743376
AA seq 652 aa
MSELPFLSPEGARGPHNNRGSQSSLEEGSVTGSEARHSLGVLNVSFSVSNRVGPWWNIKS
CQQKWDRKILKDVSLYIESGQTMCILGSSGSGKTTLLDAISGRLRRTGTLEGEVFVNGCE
LRRDQFQDCVSYLLQSDVFLSSLTVRETLRYTAMLALRSSSADFYDKKVEAVLTELSLSH
VADQMIGNYNFGGISSGERRRVSIAAQLLQDPKVMMLDEPTTGLDCMTANHIVLLLVELA
RRNRIVIVTIHQPRSELFHHFDKIAILTYGELVFCGTPEEMLGFFNNCGYPCPEHSNPFD
FYMDLTSVDTQSREREIETYKRVQMLESAFRQSDICHKILENIERTRHLKTLPMVPFKTK
NPPGMFCKLGVLLRRVTRNLMRNKQVVIMRLVQNLIMGLFLIFYLLRVQNNMLKGAVQDR
VGLLYQLVGATPYTGMLNAVNLFPMLRAVSDQESQDGLYQKWQMLLAYVLHALPFSIVAT
VIFSSVCYWTLGLYPEVARFGYFSAALLAPHLIGEFLTLVLLGMVQNPNIVNSIVALLSI
SGLLIGSGFIRNIEEMPIPLKILGYFTFQKYCCEILVVNEFYGLNFTCGGSNTSVPNNPM
CSMTQGIQFIEKTCPGATSRFTTNFLILYSFIPTLVILGMVVFKVRDYLISR
NT seq 1959 nt   +upstreamnt  +downstreamnt
atgagtgagctgccctttctgagtccagagggagccagagggcctcacaacaacagaggg
tctcagagctccctggaggaaggctcagttacaggctcagaggctcggcacagcttaggt
gtcctgaatgtgtccttcagcgtcagcaaccgtgtcgggccctggtggaacatcaaatca
tgccagcagaagtgggacaggaaaatcctcaaagatgtctccttgtacatcgagagtggc
cagaccatgtgcatcttaggtagctcaggctcagggaaaaccacgctgctggacgccatc
tctgggaggctgcggcgcacagggaccttggaaggggaagtgtttgtgaacggctgcgag
ctgcgcagggaccagttccaagactgcgtctcctacctcctgcagagcgatgtctttctg
agcagcctcacggtgcgggagacgctgagatacacggcgatgctggctctccgcagcagc
tccgcggacttctacgacaagaaggtagaggcagtcctgacagagctgagtctgagccac
gtggcagaccaaatgatcggcaactataattttggggggatttccagtggcgagcggcgc
cgagtgtccatcgcagcccaactccttcaggaccccaaggtcatgatgcttgacgagcca
accacaggactggactgcatgactgcaaatcatatcgtcctcctcttggtcgagctggct
cgcaggaaccgcattgtaattgtcaccatccaccagcctcgctctgagctcttccaccac
ttcgacaaaattgccattctgacttacggagagttggtgttctgtggcacgccagaggag
atgctcggcttcttcaataactgtggttacccctgtcctgaacattccaatccctttgat
ttctacatggacttgacatcggtggacacccaaagcagagagcgagagatagagacgtac
aagcgagtccagatgctggaatctgccttcaggcaatcggacatctgtcacaaaatcctg
gagaacattgaaagaacaagacacctgaaaaccctacccatggttcctttcaaaacgaaa
aatcctcccggaatgttctgcaagctcggcgttctcctgaggagagtaacgagaaaccta
atgaggaataagcaggtggtgattatgcgtcttgttcagaatctgatcatgggtctgttc
ctcattttctaccttctccgagtccagaacaacatgctgaagggcgctgttcaggaccgc
gtagggctgttgtaccagcttgtgggtgccaccccgtacaccggcatgctcaacgctgtg
aacctctttcccatgctgagagctgtcagcgaccaggagagtcaggatggcctgtaccag
aagtggcagatgctgctcgcctatgtgctgcatgctctccccttcagcatcgttgccacg
gtgattttcagcagcgtgtgttactggactctgggcttgtatcccgaggtcgccagattt
ggatacttctctgccgctctgttggcccctcacttaattggagaatttctgacacttgtg
ctgcttggtatggtccaaaaccccaatattgtcaacagcatagtggctctgctgagtatt
tctgggttgctcattggatctggatttatcagaaacatagaagaaatgcccattccttta
aaaatcctgggttactttaccttccaaaagtactgttgtgagattcttgtggtcaatgag
ttctatggcctgaacttcacttgtggtggctccaacacttctgtgccaaataacccaatg
tgttccatgacccaagggatccaattcattgagaaaacctgcccaggggccacgtccaga
ttcacgacaaacttcctgatcttgtactcgttcatcccgactcttgtcatcctggggatg
gtggtctttaaagtccgggactacctgattagcagatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (20)   
   Pfam (20)   
All databases (40)   

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