KEGG   Rattus norvegicus (rat): 114634
Entry
114634            CDS       T01003                                 
Symbol
Six1
Name
(RefSeq) homeobox protein SIX1
  KO
K15614  homeobox protein SIX1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    114634 (Six1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    114634 (Six1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain SINE
    114634 (Six1)
SSDB
Motif
Pfam: SIX1_SD Homeodomain Homeobox_KN HTH_3 YdaS_toxin Phage_mat-A Rrn6_K-rich
Other DBs
NCBI-GeneID: 114634
NCBI-ProteinID: NP_446211
RGD: 620906
Ensembl: ENSRNOG00000022777
UniProt: A6HC52 G3V970
Position
6:complement(97482617..97487853)
AA seq 284 aa
MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENTENNNSSSNKQNQLSPLEGGKPLMSSSEEEFSPPQSPDQNSVLLLQSNMGH
ARSSNYSLPGLTASQPSHGLQAHQHQLQDSLLGPLTSSLVDLGS
NT seq 855 nt   +upstreamnt  +downstreamnt
atgtcgatgctgccgtcgtttggttttactcaagagcaagtggcgtgcgtgtgcgaggtt
ctgcagcaaggagggaacctggaacgcctgggcaggttcttgtggtcgttgcccgcctgc
gatcacctgcacaagaacgagagcgtgctcaaggccaaggcggtggtcgccttccaccgc
ggcaacttccgcgagctctacaagatcctggagagccaccagttctcgcctcacaaccat
cccaaattgcagcagctgtggctgaaagcgcactacgtggaggccgagaaacttcgcggc
cgacccctgggtgccgtgggcaaatatcgggtgcgccgaaaattcccgttgccgcgcacc
atctgggatggcgaagagactagctactgttttaaggagaagtctcggggcgtgctgagg
gagtggtacgcgcacaacccctacccctcgccgcgggagaagcgggagctggccgaggct
acgggcctcaccaccacccaggtcagcaactggtttaagaaccggaggcaaagagaccgg
gccgccgaggccaaggaaagggagaacaccgaaaacaataactcctcctccaacaagcag
aatcaactctctcctctggaagggggcaagccgctcatgtccagctcagaagaggaattc
tcacctccccaaagtccagaccagaactcggtcctcctgctccagagcaatatgggccat
gccaggagctcaaactattctcttccgggcctaacggcctcacagcccagccatggcctg
caggctcatcagcaccagctccaggactctctgctgggcccgctcacctccagtctggtg
gacttgggttcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (23)   

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