KEGG   Rattus norvegicus (rat): 116468
Entry
116468            CDS       T01003                                 
Symbol
Rfc2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03030  DNA replication
rno03410  Base excision repair
rno03420  Nucleotide excision repair
rno03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    116468 (Rfc2)
   03410 Base excision repair
    116468 (Rfc2)
   03420 Nucleotide excision repair
    116468 (Rfc2)
   03430 Mismatch repair
    116468 (Rfc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rno03032]
    116468 (Rfc2)
   03036 Chromosome and associated proteins [BR:rno03036]
    116468 (Rfc2)
   03400 DNA repair and recombination proteins [BR:rno03400]
    116468 (Rfc2)
DNA replication proteins [BR:rno03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    116468 (Rfc2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    116468 (Rfc2)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    116468 (Rfc2)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     116468 (Rfc2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    116468 (Rfc2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 AAA_16 Viral_helicase1 AAA_24 Mg_chelatase AAA_11 Rad17 RuvB_N AAA_assoc_2 nSTAND3 AAA_18 AAA_19 MipZ AAA_5 AAA_28 AAA_25 AAA_23 T2SSE AAA_30 NTPase_1 ABC_tran MeaB RNA_helicase DUF3383 SLFN-g3_helicase FtsK_SpoIIIE DUF815
Other DBs
NCBI-GeneID: 116468
NCBI-ProteinID: NP_446238
RGD: 621198
Ensembl: ENSRNOG00000001457
UniProt: Q641W4 A6J0I4
Position
12:complement(27756920..27770049)
AA seq 349 aa
MEVQESGSGSAESGTQEPSPVPSKTTGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAR
EGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQ
QKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRC
AVLRYTKLTDAQVLSRLMNVIEKEKVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSGFGY
INSENVFKVCDEPHPLLVKEMIQHCVDANIDEAYKILAHLWHLGYSPEDVIGNIFRVCKT
FPMAEYLKLEFIKEIGYTHMKVAEGVNSLLQMAGLLARLCQKTMAPVAS
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggaggttcaggagagcggcagtggctcggctgagagtgggacgcaggagccctcgcct
gtccccagcaagaccaccggccactacgagctgccgtgggttgaaaaatacagaccagtg
aagctcaatgaaatagtgggaaacgaagacactgtgagcaggctggaggtctttgcaaga
gaaggcaatgtacccaatatcatcatcgctggccctccaggaactggcaagacaaccagc
atcctctgcttggcgagagcgctgctgggcccggccctgaaggatgcagttctggaactc
aatgcgtccaacgacaggggcatcgatgtggtaaggaataaaatcaaaatgttcgcccag
cagaaagtcacccttcccaagggccgacacaagatcatcattctggatgaggcagacagc
atgacggatggtgcccagcaggccctcaggagaaccatggaaatctactccaaaacgact
cgcttcgctctggcttgtaatgcttcagacaaaatcatagagcccatccagtcccgctgt
gcggtgctccgctacaccaagctcaccgatgcacaggtcctcagcaggctcatgaatgtc
atcgagaaggaaaaagtgccatacacagatgacggcctggaagccatcattttcacagcc
cagggagacatgcgccaggctctgaacaacttgcagtccaccttctcaggatttggctat
atcaacagcgagaatgtattcaaggtctgtgacgagccccaccccctgctggtgaaggag
atgatccagcactgtgtggacgccaacattgatgaggcctataagattcttgctcacctg
tggcacctgggctactcgccagaagatgtcatcggcaatattttccgtgtgtgtaaaacc
ttcccaatggctgaatacttgaaactggagttcatcaaggagattggatacacccacatg
aaagtggccgaaggagtgaactccctgctgcagatggccgggctcctggccaggctgtgt
cagaagaccatggctccggtggccagctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (31)   
   Pfam (31)   
All databases (56)   

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