KEGG   Rattus norvegicus (rat): 116479
Entry
116479            CDS       T01003                                 
Symbol
F11r
Name
(RefSeq) junctional adhesion molecule A precursor
  KO
K06089  junctional adhesion molecule 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04514  Cell adhesion molecules
rno04530  Tight junction
rno04670  Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    116479 (F11r)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    116479 (F11r)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    116479 (F11r)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:rno04090]
    116479 (F11r)
CD molecules [BR:rno04090]
 Proteins
  116479 (F11r)
SSDB
Motif
Pfam: Ig_3 ig I-set Ig_2 V-set C1-set C2-set_2 Adeno_E3_CR1 Ig_C17orf99 V-set_CD47 Invasin_D3
Other DBs
NCBI-GeneID: 116479
NCBI-ProteinID: NP_446248
RGD: 621842
Ensembl: ENSRNOG00000004414
UniProt: Q9JHY1
Position
13:86406229..86429819
AA seq 300 aa
MGTEGKAGSKLLFLFTSMILGSLVQGKGSVYSPQTAVQVPENDSVKLPCIYSGFSSPRVE
WKFVQGSTTALVCYNNQITVPYADRVTFSSSGITFSSVTRKDNGEYTCMVSEDGGQNYGE
VSIHLTVLVPPSKPTVSIPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGVPMLTADAKKT
RAFINSSYTIDPKSGDLVFDPVSAFDSGEYYCEAQNGYGTAMRSEAVRMEAVELNVGGIV
AAVLVTLILLGLLIFGIWFAYSRGYFERTKKGTAPGKKVIYSQPSARSEGEFKQTSSFLV
NT seq 903 nt   +upstreamnt  +downstreamnt
atgggcaccgaggggaaagccgggagcaaactgttgtttctcttcacgtctatgatcctg
ggctccttggtgcaaggcaagggttcggtgtacagtcctcagactgccgtccaggttcct
gagaacgactctgtcaagttgccctgtatctactctggcttctcctcaccccgcgtggag
tggaagttcgtccaaggcagcaccactgcgcttgtgtgctataacaaccagatcacagtt
ccctatgcagaccgcgtcaccttctcatccagtggcatcaccttcagctctgtgacccgg
aaagacaatggagagtatacttgcatggtctctgaggacgggggtcagaactacggggag
gtcagcatccacctcactgtgcttgtgcctccatccaagccgacagtcagtatcccctcc
tctgtcaccattgggaacagggcagtgctgacctgctcagaacacgacggttcccctcct
tctgaatattcctggttcaaggatggggtacctatgcttacagcagatgccaagaaaacc
cgtgccttcatcaattcttcatacaccatcgatccaaagtcaggggatttggtctttgac
cctgtgtcagcctttgatagtggcgaatactactgcgaggcacagaacgggtatgggaca
gccatgaggtcagaggctgtacgcatggaggctgtggagctgaatgtggggggcatcgtg
gcagctgtcctggtaacactgattctccttggactcctgatttttggcatctggtttgcc
tatagccgtggatactttgaaagaacaaagaaagggactgcaccgggtaagaaggtcatt
tacagccagcccagtgctcgcagtgagggagaattcaaacagacctcgtcattcctggtg
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (11)   
   Pfam (11)   
All databases (33)   

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