KEGG   Rattus norvegicus (rat): 116508
Entry
116508            CDS       T01003                                 
Symbol
Nrxn3
Name
(RefSeq) neurexin-3 precursor
  KO
K07377  neurexin
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    116508 (Nrxn3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    116508 (Nrxn3)
Membrane trafficking [BR:rno04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Others
    116508 (Nrxn3)
SSDB
Motif
Pfam: Laminin_G_2 Laminin_G_1 Laminin_G_3 EGF Syndecan
Other DBs
NCBI-GeneID: 116508
NCBI-ProteinID: NP_446269
RGD: 620212
Ensembl: ENSRNOG00000047574
UniProt: Q07310
Position
6:113372667..115004073
AA seq 1578 aa
MSFTLHSVFFTLKVSIFLGSLVGLCLGLEFMGLPNQWARYLRWDASTRSDLSFQFKTNVS
TGLLLYLDDGGVCDFLCLSLVDGRVQLRFSMDCAETTVLSNKQVNDSSWHFLMVSRDRVR
TGLVIDGEGQSGELRPQRPYMDVVSDLFLGGVPADIRPSALTLDGVQNMPGFKGLMLDLK
YGNSEPRLLGSQSVQLEAEGPCGERPCENGGICFLLDGHPTCDCSTTGYGGTLCSEDVSQ
GPGLSHLMMSEQGRSKAREENVATFRGSEYLCYDLSQNPIQSSSDEITLSFKTWQRNGLI
LHTGKSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDVKVTRNLRQVTI
SVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDIR
LELSRLARIGDTKMKIYGEVVFKCENVATLDPINFETPEAYISLPKWNTKRMGSISFDFR
TTEPNGLILFTHGKPQERKDVRSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKVKATQKK
ANDGEWYHVDIQRDGRSGTISVNSRRTPFTASGESEILDLEGDMYLGGLPENRAGLILPT
ELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEMQNAAGVKSSCSRMSAKQCDSYPCKNNA
VCKDGWNRFICDCTGTGYWGRTCEREASILSYDGSMYMKVIMPMVMHTEAEDVSFRFMSQ
RAYGLLVATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNSSKGPETLYAGQKLNDNEW
HTVRVVRRGKSLKLTVDDDVAEGTMVGDHTRLEFHNIETGIMTEKRYISVVPSSFIGHLQ
SLMFNGLLYIDLCKNGDIDYCELKARFGLRNIIADPVTFKTKSSYLTLATLQAYTSMHLF
FQFKTTSADGFILFNSGDGNDFIAVELVKGYIHYVFDLGNGPNVIKGNSDRPLNDNQWHN
VVITRDNSNTHSLKVDTKVVTQVINGAKNLDLKGDLYMAGLAQGMYSNLPKLVASRDGFQ
GCLASVDLNGRLPDLINDALHRSGQIDRGCEGPSTTCQEDSCANQGVCMQQWEGFTCDCS
MTSYSGNQCNDPGATYIFGKSGGLILYTWPANDRPSTRSDRLAVGFSTTVKDGILVRIDS
APGLGDFLQLHIEQGKIGVVFNIGTVDISIKEERTPVNDGKYHVVRFTRNGGNATLQVDN
WPVNEHYPTGNTDNERLQMVKQKIPFKYNRPVEEWLQEKGRQLTIFNTQAQIAIGGKDKG
RLFQGQLSGLYYDGLKVLNMAAENNPNIKINGSVRLVGEVPSVSGTTQTTSMPPEMSTTV
METTTTMATTTTRKNRSTASIQPTSDDLVSSAECSSDDEDFVECEPSTGRSDKSLSTSIF
EGGYKAHAPKWESKDFRPNKVSETSRTTTTSLSPELIRFTASSSSGMVPKLPAGKMNNRD
LKPQPDIVLLPLPTAYELDSTKLKSPLITSPMFRNVPTANPTEPGIRRVPGASEVIRESS
STTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYQVDETRNYISNSAQSNGTLMKEKQA
SSKSGHKKQKNKDKEYYV
NT seq 4737 nt   +upstreamnt  +downstreamnt
atgagctttaccctccactcagttttcttcaccctgaaggtgagcatctttctgggctcc
ctggtggggctctgcctgggtctggagttcatgggcctccctaaccagtgggcccgctat
ctacgctgggatgctagcacgcgcagtgacctgagcttccagttcaagaccaatgtttcc
actgggctgctcctgtatttggatgatggtggtgtctgtgacttcctctgcctctccctg
gtggatggccgtgttcagctccgctttagcatggactgcgccgagaccactgtgttgtcc
aacaagcaggtgaacgacagcagttggcacttcctcatggtgagccgtgaccgtgtgcgc
actgggctggtgattgatggtgagggccagtctggtgagctacggccccagcggccctac
atggatgtggtcagtgatttgttcctcggtggcgtccccgctgacattcgaccttctgcc
ctgacccttgatggagtacagaacatgcctggctttaagggattaatgctggatctcaag
tatggcaactcggaacctcggcttctcgggagccagagtgtccagttagaagcagaggga
ccctgtggcgagcgtccctgtgaaaatggtgggatctgcttcctcttggatggtcatccc
acctgtgactgttctaccactggctatggcggcacactctgctcagaagatgtcagtcaa
ggtccaggcctctcccatcttatgatgagtgaacaaggtagaagtaaagctcgagaggag
aacgtggccaccttccgaggctcagagtatctgtgctatgacctgtcccagaaccccatc
cagagcagcagcgatgaaatcaccctttcctttaagacctggcaacgcaatgggctcatc
ctccacacgggcaagtcggccgactatgttaacctggctctgaaggatggtgcggtctcc
ttggtcattaacctggggtccggggcctttgaggccattgtggagccagtgaatgggaaa
ttcaacgacaacgcctggcatgatgtcaaagtgacacgcaatcttcggcaggtgacaatc
tctgtggatggcatcctaacaacaacaggctacactcaagaggactacaccatgctgggc
tcagatgacttcttctatgttggtggaagcccaagcactgcggacttgccaggctcacct
gtgagcaacaacttcatgggctgccttaaagaggttgtttataagaataatgacatccgt
ctggagctgtctcgcttggcccggattggggacaccaagatgaaaatctatggtgaagtt
gtgttcaagtgtgagaacgtggccactctggaccccatcaactttgagaccccagaggct
tacatcagcttgcccaagtggaacaccaaacgtatgggttccatctcctttgactttcgc
accactgagcccaacggtctgatcctcttcactcacgggaaaccccaagaaaggaaagac
gtccggagccagaagaacacaaaagttgacttctttgctgtggaacttcttgatggcaac
ctgtatttgctgcttgacatgggctctggcaccatcaaagtgaaggccactcagaagaaa
gccaatgatggggaatggtaccacgtggacattcagcgggatggcagatcaggtaccata
tctgtgaacagcaggcgcacaccgttcaccgccagtggggaaagtgaaatcttggacctg
gagggggacatgtatctgggcggactgccagagaaccgggctggcctcattctccccacg
gagctctggactgccatgctcaactacggttatgtgggctgcatccgcgacctgttcatc
gatgggcgcagcaaaaacatccggcagctggcggagatgcagaatgcagcaggcgtcaag
tcctcctgttcacgcatgagcgccaagcagtgtgacagctacccctgcaagaacaatgcg
gtgtgcaaggacggctggaaccgcttcatctgcgactgcactggcaccggctactggggt
agaacctgtgaaagagaggcatccatcctgagctatgacggcagcatgtatatgaaggtc
atcatgcccatggtgatgcacacagaggcagaggatgtttccttccggttcatgtcccag
cgagcctatgggctactggtagcgactacctccagggattctgcagatacactgcgtcta
gagttggatggtgggcgtgtcaagctcatggttaacttagactgtatcaggataaactgt
aactccagcaaaggacctgagaccctgtacgcagggcagaagctcaatgacaatgagtgg
cataccgtccgggtagtgcgaagaggaaaaagccttaaactaacagtggacgatgatgtg
gctgagggtacgatggtgggcgaccacacccgcctggagttccacaatattgagactggt
atcatgacggagaagcgttacatctccgtggtcccctccagtttcatcggccatctacag
agcctcatgttcaatggcttgctgtacatcgatttgtgcaaaaatggtgacatcgactac
tgcgaactgaaggctcgttttggactgagaaacatcatcgctgaccctgtcacttttaag
accaagagcagctacctgacccttgccaccctccaggcttacacttccatgcatctcttt
ttccagttcaagaccacttcagctgatggcttcattctcttcaacagtggtgatggcaat
gattttattgcagttgaattggtcaaggggtacatacactatgtgtttgatcttggcaat
ggtcccaatgtgatcaaaggcaacagtgaccgtcctctgaatgacaaccagtggcacaac
gttgtcatcactcgggacaacagtaatacccacagcctgaaagtggacaccaaggtagtc
actcaggtcatcaatggtgccaagaatctggatttgaaaggtgacctctatatggctggc
ttagcccagggcatgtatagcaaccttccaaagctcgtggcctctcgggatggatttcag
ggttgcctggcctctgtggacttgaatgggcgcctgcctgatctcatcaacgatgctctc
cacaggagtggacagattgatcgaggctgtgaaggacccagtacaacctgtcaggaggat
tcatgtgccaaccagggggtttgcatgcagcagtgggaaggttttacatgtgactgctcc
atgacatcatattctggaaaccagtgcaatgaccctggtgccacatatatctttgggaaa
agcggtggtctcatcctctacacctggccagcaaatgacagacccagcacacgctctgac
cgcctcgccgtgggattcagcaccactgtgaaggatggtatcttagtacgcatcgacagt
gcccctggacttggcgactttctccagcttcacatagaacaagggaaaattggagttgtc
ttcaatattggcacagttgacatctccatcaaagaagagagaacccctgtcaacgatggc
aaataccatgtggtgcgcttcaccagaaatgggggcaatgcaacccttcaggtggacaac
tggccagtgaatgagcattatcctacaggcaacactgataatgaacgcctccaaatggta
aaacagaaaatccccttcaaatataatcggcctgtagaggagtggctgcaggaaaaaggc
cggcagctaaccatcttcaacacccaggcgcaaatagccatcggaggaaaggacaaagga
cgtctcttccaaggccaactctctgggctctattatgatggtttgaaagtactgaacatg
gcggctgagaacaaccctaatattaaaatcaatggaagtgtccggctagtgggagaagtc
ccatcagtctcgggaacaacacaaacaacctccatgccacctgaaatgtctaccactgtc
atggaaaccaccaccacgatggctacgaccaccacccgcaaaaaccgctctacagccagc
attcagccaacatcagatgaccttgtttcatctgctgaatgctcaagtgatgatgaagac
tttgtcgagtgtgaaccaagtacaggtaggtcagataagagtctttccacttcaatcttc
gaaggtggctacaaagcgcatgcgcccaagtgggaatccaaggactttagacctaacaaa
gtctcggaaactagtagaactacaaccacctctttgtcccctgagctgatccgcttcaca
gcgtcctcctcgtctgggatggtgcccaaattgccagctggcaaaatgaataaccgtgat
ctcaaaccccagcctgatatagtcttgcttccgttgcccactgcctatgagctagacagc
accaaactgaagagcccactaattacttcccccatgttccgtaatgtgcccacagcaaac
cccacggagccaggaatcagacgggttccgggggcctcagaggtgatccgggagtccagc
agtacaacagggatggtcgtcggcattgtggctgctgccgccctctgcatcttgatcctc
ctgtacgccatgtacaagtacaggaacagggacgaggggtcctatcaagtggacgagacg
aggaactacatcagcaactcggcccagagcaacggcacgctcatgaaggagaaacaagcc
agctccaagagcggccataagaaacagaaaaacaaggacaaggagtattatgtgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (53)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (51)   
DNA sequence (53)   
   RefSeq(nuc) (51)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (121)   

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