KEGG   Rattus norvegicus (rat): 116600
Entry
116600            CDS       T01003                                 
Symbol
Cacnb2
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-2 isoform 2
  KO
K04863  voltage-dependent calcium channel beta-2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04010  MAPK signaling pathway
rno04260  Cardiac muscle contraction
rno04261  Adrenergic signaling in cardiomyocytes
rno04921  Oxytocin signaling pathway
rno05410  Hypertrophic cardiomyopathy
rno05412  Arrhythmogenic right ventricular cardiomyopathy
rno05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    116600 (Cacnb2)
 09150 Organismal Systems
  09152 Endocrine system
   04921 Oxytocin signaling pathway
    116600 (Cacnb2)
  09153 Circulatory system
   04260 Cardiac muscle contraction
    116600 (Cacnb2)
   04261 Adrenergic signaling in cardiomyocytes
    116600 (Cacnb2)
 09160 Human Diseases
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    116600 (Cacnb2)
   05412 Arrhythmogenic right ventricular cardiomyopathy
    116600 (Cacnb2)
   05414 Dilated cardiomyopathy
    116600 (Cacnb2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    116600 (Cacnb2)
Ion channels [BR:rno04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   116600 (Cacnb2)
SSDB
Motif
Pfam: Guanylate_kin VGCC_beta4Aa_N SH3_1
Other DBs
NCBI-GeneID: 116600
NCBI-ProteinID: NP_446303
RGD: 67385
Ensembl: ENSRNOG00000018378
UniProt: Q8VGC3 A0A0G2JSZ0 A6JM63
Structure
Position
17:82473097..82818564
AA seq 604 aa
MQCCGLVHRRRVRVSYGSADSYTSRPSDSDVSLEEDREAVRREAERQAQAQLEKAKTKPV
AFAVRTNVRYSAAQEDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPS
PVKLENMRLQHEQRAKQGKFYSSKSGGNSSSSLGDIVPSSRKSTPPSSAIDIDATGLDAE
ENDIPANHRSPKPSANSVTSPHSKEKRMPFFKKTEHTPPYDVVPSMRPVVLVGPSLKGYE
VTDMMQKALFDFLKHRFEGRISITRVTADISLAKRSVLNNPSKHAIIERSNTRSSLAEVQ
SEIERIFELARTLQLVVLDADTINHPAQLSKTSLAPIIVYVKISSPKVLQRLIKSRGKSQ
AKHLNVQMVAADKLAQCPPQESFDVILDENQLEDACEHLADYLEAYWKATHPPSSNLPNP
LLSRTLATSTLPLSPTLASNSQGSQGDQRTDRSAPRSASQAEEEPCLEPVKKSQHRSSSA
THQNHRSGTGRGLSRQETFDSETQESRDSAYVEPKEDYSHEHVDRYVPHREHNHREESHS
SNGHRHREPRHRTRDMGRDQDHNECSKQRSRHKSKDRYCDKEGEVISKRRSEAGEWNRDV
YIRQ
NT seq 1815 nt   +upstreamnt  +downstreamnt
atgcagtgctgcgggctggtacatcgccggcgagtacgggtgtcctatggttcggcagac
tcctacaccagccgcccatcggattcagatgtgtctttggaagaggaccgggaggcagtc
cgtagagaagctgagcggcaggcccaggcccagttggaaaaagcaaagacaaaacctgtt
gcatttgcagttcggaccaatgtcaggtacagcgcagcccaggaggatgacgtcccggtg
cccggcatggccatctcattcgaggcaaaagattttctgcatgttaaggaaaaatttaat
aatgactggtggataggacggctggttaaagaaggctgtgaaatcggatttattccaagc
ccggtcaaactagagaacatgaggctacagcatgaacagagagccaagcaagggaaattc
tactccagtaaatcaggaggaaattcatcatccagtttgggtgacatagtacccagttcc
agaaaatcgacacctccatcatctgctatagacatagatgctactggcttagatgcagaa
gagaatgatattccagcaaaccaccgctcccctaagcccagtgcaaacagtgtaacgtca
ccccactccaaagagaaaagaatgcccttctttaagaagacagagcacactcctccttac
gatgtggtaccatccatgagaccagtggtgttggtgggcccctccctgaaggggtatgag
gtcacagatatgatgcaaaaagcactgtttgattttctaaaacacagatttgaaggacgg
atatccatcacaagagttactgctgacatctccctggccaaacgctcagtattaaacaac
cccagtaagcacgcaataatagaaagatccaacacaaggtcgagcttagcggaagttcag
agtgaaattgaaaggatttttgaacttgcaagaacactgcaattggtagtccttgacgcg
gatacaattaatcacccagctcaactcagtaagacctctctggcccctatcatagtgtat
gtaaagatttcttctcctaaggttttacaaaggttaataaaatctcgaggaaagtctcaa
gcaaagcacctcaatgtccagatggtggcagccgataaactggcccagtgtcccccgcag
gagtcatttgatgtgatcttggatgagaaccaacttgaggatgcttgtgagcatctcgcc
gactatctggaggcgtactggaaggccacccaccctcccagcagtaacctccccaaccct
ctccttagccggactttagccacctcaactttacctctgagccccacccttgcctctaat
tcacagggttctcaaggtgatcagaggactgatcgctctgctccccggtctgcttcccaa
gctgaagaagaaccttgtctggaaccagtcaaaaaatcccaacaccgttcttcctcagcc
acacaccaaaaccaccgcagtgggacaggtcgaggcctctctaggcaagaaacgtttgac
tctgaaacccaagagagccgagactctgcctacgtggagccaaaggaagattattcacat
gaacatgtggaccgctatgttccacaccgtgaacataaccacagagaggagagccacagc
agcaatggccacaggcacagggagcctcgccaccgcactagggacatgggtcgagaccag
gaccacaatgagtgcagcaaacaacgaagccggcataaatctaaggatcgctactgtgac
aaggaaggggaagtaatatccaaaagaaggagtgaggctggcgagtggaacagggatgta
tacatccgccaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (22)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (18)   
DNA sequence (30)   
   RefSeq(nuc) (18)   
   GenBank (6)   
   EMBL (6)   
3D Structure (5)   
   PDB (5)   
Protein domain (3)   
   Pfam (3)   
All databases (76)   

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