KEGG   Rattus norvegicus (rat): 116640
Entry
116640            CDS       T01003                                 
Symbol
Tnc
Name
(RefSeq) tenascin precursor
  KO
K06252  tenascin
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04151  PI3K-Akt signaling pathway
rno04510  Focal adhesion
rno04512  ECM-receptor interaction
rno05165  Human papillomavirus infection
rno05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    116640 (Tnc)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    116640 (Tnc)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    116640 (Tnc)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    116640 (Tnc)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    116640 (Tnc)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:rno00536]
    116640 (Tnc)
Glycosaminoglycan binding proteins [BR:rno00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   116640 (Tnc)
SSDB
Motif
Pfam: fn3 Fibrinogen_C EGF_2 EGF_Tenascin Pur_ac_phosph_N EGF NDNF DUF4998 Interfer-bind fn3_2 hEGF
Other DBs
NCBI-GeneID: 116640
NCBI-ProteinID: NP_446313
RGD: 621057
Ensembl: ENSRNOG00000058645
UniProt: B2LYI9
Position
5:complement(82391340..82476197)
AA seq 2019 aa
MGAVTWLLPGIFLALFALTPEGGVLKKVIRHKRESGLNLTLPEENQPVVFNHIYNIKLPM
GSQCSVDLESTSGEKDLSPTPESSGSFQEHTVDGENQIVFTHRINIPRRACGCAAAPDVK
ELLSRLEELEMLVSSLREQCTMGTGCCLQPAEGRLDSRPFCSGRGNFSAEGCGCVCEPGW
KGPNCSEPECPGNCNLRGQCLDGQCICDQGFTGEDCSQLACPNDCNDQGKCVNGVCVCFE
GYAGLDCGLEVCPVPCSEEHGMCVDGRCVCKDGFAGEDCNEPLCFNNCNNRGRCVENECV
CDEGFTGEDCSELICPNDCFDRGRCINGTCYCEEGFTGEDCGELTCPNNCQGHGQCEEGQ
CVCNEGFAGADCSEKRCPADCHHHGRCLNGQCECDDGFTGADCGELQCPNGCSGHGRCVN
GQCVCDEGYTGEDCSQRRCPNDCHNRGHCVQGKCICEQGFKGFDCSEMSCPNDCHQHGRC
VNGMCICDDDYTGEDCRDRRCPRDCSQRGRCVDGQCICEDGFTGSDCAELSCPGDCHGHG
RCVNGQCICHEGFTGKDCKEQRCPSDCHGQGRCEDGQCICHEGFTGLDCGQRSCPNDCSN
QGQCVAGRCICNEGYTGVDCSEVSPPKDLIVTEVTEETVNLAWDNEMRVTEYLIMYTPTH
ADGLEMQFRVPGDQTSTTIRELEPGVEYFIHVFAILENKRSIPVSARVATYLPAPEGLKF
KSIKETSVEVEWDPLDIAFETWEIIFRNMNKEDEGEITKSLRRPETSYRQTGLAPGQEYE
ISLHIVKNNTRGPGLKKVTTTRLDAPSQIEVRDITDTTALITWSKPLAEIDSIELSYGIK
DVPGDRTTIDLTHEDNQYSIGNLKPDTEYEVSLISRRVDMASNPAKETFITGLDAPRNLR
RVSQTDNSITLEWRNVKADIDSYRIKYAPISGGDHAEIDVPKSQQATTKTTLTGLRPGTE
YGVGVSAVKGDKEGDPATINAATEIDAPRDLQVSETTQDSLTLFWKTPLAKFDRYRLNYS
LPTGQSIEIQLPKDATSHVLTDLEPGQEYTVLLTAEKGRHKSKPARVKASTEEVPSLENL
TVTEAGWDGLRLNWTADDLAYEYFVIQVQEANKVETAHNFTVLGNLRTADIPGLKAATPY
RVSIYGVARGYKTPVLSAETFTGKTPSLGEVTVAEVGWDALKLNWTAPEGAYTNFFIQVL
EADMTQTVQNLTVPGGLRSVDLPGLKAATRYYITVRGVTQDFSTAPLSVEVLTEEIPQLG
GLSVTEVSWDSLTLNWTTDDLAYKHFIIQVQEANNVEAAQNLTVSGSLRVVDIPGLKADT
PYRVSIYGVIQGYRTPMLSADVSTAKEPEIGNLNISDVTPESFNLSWTATDGIFDMFTIE
IIDSNRLLQTAEHNISGAERTAHISGLPPSTDFIVYLSGIAPSIRTKTISTTATTEAEPE
VDNLLVSDATPDGFRLSWTADEGIFDSFVIRIRDTKKQSEPQEITLPSPDRTRDITGLRE
ATEYEIELYGISRGRRSQPVSAIATTAMGSPKEIMFSDITENAATVSWRAPTAQVESFRI
TYVPVTGGPPSMVTVDGTDTETRLVRLTPGVEYHVSVIAMKGFEESDPVSGSLITALDGP
SGLLTANITDSEALAMWQPAIATVDSYVISYTGERVPEITRTVSGNTVEFELHDLEPATE
YTLSVFAEKGHQKSSTIATKFTTDLDSPRELTATEVQSETALLTWRPPRASVTGYLLVYE
SVDGTVKEVIVGPDTTSYSLADLSPSTHYTARIQALSGSLRSKLIQTIFTTIGLLYPFPR
DCSQAMLNGDTTSGLYTIYINGDKTQALEVYCDMTSDGGGWIVFLRRKNGREDFYRNWKA
YAAGFGDRREEFWLGLDNLSKITAQGQYELRVDLQDHGESAYAVYDRFSVGDAKSRYKLK
VEGYSGTAGDSMNYHNGRSFSTYDKDTDSAITNCALSYKGAFWYKNCHRVNLMGRYGDNN
HSQGVNWFHWKGHEYSIQFAEMKLRPSNFRNLEGRRKRA
NT seq 6060 nt   +upstreamnt  +downstreamnt
atgggggccgtgacctggctattgccaggcatcttcctagctttgtttgccctcactcct
gaaggtggggtcctcaagaaagtcatcaggcacaagcgagagagtgggctgaacttgacc
ttgccagaggagaatcagccagtggtgttcaaccatatctacaacatcaagttgcccatg
ggttctcagtgctcagtggatctagagtcaacgagtggagagaaagacctgagccccaca
ccagagtccagtggaagcttccaggagcatacagtggatggggaaaatcagattgtgttc
acacaccgcatcaacatccctcgtcgggcctgtggctgtgccgcagctccagatgtgaag
gagctcctgagcagactggaggaactggagatgttggtatcttctctaagggagcagtgc
accatgggtacaggctgttgcctccaacctgcagaaggccgtctggacagcaggcccttc
tgcagcggcaggggtaacttcagtgctgaaggttgtggctgtgtctgtgaaccaggctgg
aaaggtcccaactgctctgagcctgaatgccctggaaactgtaatctcagaggccagtgc
cttgatggacagtgtatctgtgaccagggtttcactggggaagactgcagccagctagcc
tgtcccaatgactgcaatgaccagggcaagtgtgtgaatggggtctgtgtgtgcttcgaa
ggctatgccggccttgactgtggcctggaagtctgcccagtgccgtgcagcgaggaacac
gggatgtgtgtggatggcaggtgtgtgtgcaaagatggctttgctggtgaagactgcaat
gagcccctttgcttcaacaactgcaacaaccgtgggcggtgtgtggagaacgaatgcgtc
tgtgatgagggcttcacgggcgaagactgcagcgagctcatttgccccaatgactgcttc
gaccgaggtcgctgcatcaacggcacctgctactgtgaagaaggtttcacaggtgaagac
tgtggtgagctcacctgccccaacaactgtcagggccatggccagtgtgaagagggacag
tgtgtttgcaacgagggctttgcaggggcagactgcagtgaaaagcggtgtcccgcagac
tgtcaccaccatggccgctgtctcaacggacagtgtgagtgtgacgatgggttcacaggg
gctgactgtggggaactccagtgccccaatggctgcagtgggcatggccgctgtgtcaat
gggcagtgtgtgtgtgacgagggctacaccggagaagactgtagccaacggcgatgcccc
aatgactgccacaaccggggtcactgtgtacagggcaaatgcatatgtgagcaaggcttc
aaaggctttgactgtagtgagatgagctgtcccaatgactgccaccagcatggccgctgt
gtgaatggcatgtgcatctgtgatgatgactacactggggaagactgcagagaccgccgc
tgtccccgggactgtagccagagggggcgctgtgtggacggacagtgcatttgtgaggat
ggtttcactggttctgactgtgctgagctctcctgccctggtgactgccacggccatggc
cgctgtgtgaatggccaatgcatctgccacgagggcttcaccggcaaagactgcaaagag
caaaggtgccccagtgactgccacggccaaggccgctgtgaggacggccaatgtatctgt
catgagggcttcacaggcctggactgtgggcagcgctcctgtcccaatgactgcagcaac
cagggacaatgtgtggcaggccgctgcatctgcaatgaaggctacacaggggtagactgc
tctgaggtgtcccctcccaaagaccttattgtgacagaagtaacagaggagactgtaaat
ctggcatgggacaatgagatgcgggtcactgagtacctcattatgtacacacccacccat
gctgatggcctggagatgcagttccgtgtgcctggggaccagacatctaccaccatccgg
gagctggagccaggagtggagtacttcattcatgtgttcgccatcttggagaacaagagg
agcatccctgtcagtgccagagttgccacctacttgcctgcacctgaaggcctaaaattc
aagtctatcaaggagacatctgtggaagtagagtgggatcctctggacatcgcttttgaa
acgtgggagatcattttcagaaatatgaacaaagaagatgagggagagatcacaaaaagc
ttgaggaggccagagacctcctaccgccaaactggcctggctcctggccaagaatatgaa
atatctcttcacattgtgaaaaacaacacccgaggccctggcttgaagaaagtgaccaca
actcgcctggatgcccccagccaaattgaggtgagagacatcacagacactacagcactg
atcacctggtccaagcccttggctgaaattgatagcattgagctctcctatggcatcaag
gatgtgcctggagaccggaccaccatcgacctcacacatgaagacaaccagtactccatc
gggaacctgaaacctgacacggagtatgaggtgtccctcatctcccgcagagtggacatg
gcaagcaaccctgccaaggagaccttcatcacaggcctggatgctcccaggaatctccgt
cgcgtctcacagacagacaacagcatcaccttggagtggaggaatgtcaaggcagacatt
gatagttatagaattaagtatgcacctatctctggaggtgaccatgctgagatagatgtt
ccaaagagccagcaagccacaaccaaaaccacactcacaggtctaaggccaggaactgaa
tatggagtgggcgtctctgctgttaagggagacaaggagggcgatccagcaaccatcaat
gcagccacagaaattgatgcacccagggacttacaggtgtctgagaccacacaagacagt
ctgactttattctggaagacacctctggccaagtttgatcgttaccgcctcaactacagc
ctccccacaggccagtcaatagagattcagctgccaaaggatgccacctcccatgtcctg
acagacctggagccagggcaagaatacactgttctcctcaccgctgagaagggcagacat
aagagcaagcctgcgcgtgtgaaggcatccacagaagaagtaccttctctggaaaatctc
accgtgaccgaggccggctgggatggcctcagactcaactggactgcagatgacctggcc
tatgagtactttgttattcaggtacaggaagccaacaaggtggagactgctcacaacttc
acagtacttggtaacctccggactgcagacatcccgggcctcaaggctgccactccttat
agagtctccatttatggggtagctcggggctataaaacacccgtgctctctgctgagacc
ttcacagggaaaactcccagtttgggagaggtgactgtggctgaggtgggctgggatgcc
ctcaagctcaactggactgctccagaaggagcctatacgaactttttcattcaggtgcta
gaggctgacatgacccagactgtccagaacctcacagtcccagggggactgaggtcagtg
gacctacctgggctcaaagcagccacccgctattacatcaccgttcgaggggtcacccag
gacttcagcacagcccctctctctgttgaggtcttgacagaggagatccctcaactggga
ggcttgtccgtgactgaggtcagctgggacagccttacactcaactggaccacagatgat
ctggcctataaacactttatcattcaggtgcaggaggccaacaatgtagaggctgctcag
aacctcacagtatctggtagcctcagagttgtggacatcccaggcctcaaggctgatacc
ccttatagagtctccatctatggggtgatccagggctatagaacaccaatgctctctgct
gatgtctccacagccaaagaacctgaaattggaaacttaaatatttctgatgtaactcct
gagagcttcaatctctcctggacagctaccgacgggatcttcgacatgtttactatcgaa
attattgattctaataggttgctgcagacagcagaacataatatatctggtgctgaacga
actgcccacatctcgggccttccacctagtactgatttcattgtctacctctctggaatt
gctcccagcatccgtaccaaaaccatcagtaccacagccaccacagaagctgaaccggaa
gttgacaaccttctagtttcagatgctactccagacggtttccgtctgtcctggactgct
gatgaagggatattcgacagttttgttatcaggatcagagataccaaaaagcaatctgaa
ccacaagaaataaccctcccttcccccgaccgtaccagggacataacaggtctcagagag
gccactgagtacgaaattgaactctatggaataagccgtggaaggcgatcccagccagtc
agtgccatagcaacaacagccatgggttctccgaaggaaatcatgttctcagacatcact
gaaaatgcagccacagtcagctggagagcaccgactgctcaagtggagagtttccggatt
acttatgtgcctgtaacaggaggtcccccatccatggtgaccgtggatgggacggatact
gagacccgactggtgaggctcacccctggagtggagtaccacgtcagtgtgattgccatg
aagggatttgaagaaagtgatccggtctcggggtctctaatcacagctctcgatggtcca
tctggccttctgacagccaacatcacagactcagaagccttggccatgtggcagccagcc
attgccactgtagacagttatgtcatctcctacacaggggagagagtgccagaaattacc
cgcacagtgtctgggaatacagtggagtttgaactacatgacctggagcctgccacagag
tacacactgagtgtctttgcagagaaaggtcaccagaagagttctaccatcgctacgaaa
tttaccacagacctggattccccaagagaattgactgctactgaggttcagtcagaaact
gccctcctcacctggagacctccccgggcatcggtcactggatacctcctggtctatgag
tctgtggatggtacagtcaaggaagtcattgtggggcctgacaccacctcctacagcctg
gcagacctgagcccatccacccactacacagcaagaatccaggcattgagtgggtccctg
aggagcaaactgatccaaaccatcttcaccacaattggactcctatatccattccctagg
gattgctctcaagcaatgttgaatggcgacaccacctctggcctctataccatctatata
aatggtgacaagactcaagcactggaagtctactgtgatatgacctctgatggaggtgga
tggatcgttttcctgagacgcaaaaatggacgtgaggacttctatcgaaactggaaggcc
tatgccgctgggtttggagaccgcagagaagaattctggcttggactggataacctgagc
aaaatcacagcccaagggcaatatgagctccgggtggacctacaagaccatggggagtca
gcctatgctgtgtatgacaggttcagtgttggagatgccaagagtcgctacaagctgaag
gtagaaggatacagtggaacggcaggtgactccatgaactatcacaatggtagatccttc
tctacctatgacaaggacacagactcagccatcaccaactgtgccctgtcctacaaagga
gctttctggtataagaactgtcatcgtgtcaacctgatgggcagatatggggacaataat
cacagtcagggtgttaactggttccactggaagggccatgagtactcaatccagtttgcg
gagatgaaactaagacccagcaacttccgaaatctggaaggcaggcgtaagcgggcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (12)   
   UniProt (1)   
   RefSeq(pep) (11)   
DNA sequence (25)   
   RefSeq(nuc) (11)   
   GenBank (7)   
   EMBL (7)   
Protein domain (11)   
   Pfam (11)   
All databases (62)   

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