KEGG   Rattus norvegicus (rat): 116658
Entry
116658            CDS       T01003                                 
Symbol
Cntn4
Name
(RefSeq) contactin-4 precursor
  KO
K06762  contactin 4
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    116658 (Cntn4)
Cell adhesion molecules [BR:rno04515]
 Immunoglobulin superfamily
  Contactins
   116658 (Cntn4)
SSDB
Motif
Pfam: Ig_3 I-set ig Ig_2 fn3 V-set Ig_5 V-set_CD47 Sp38 Ig_C17orf99 C2-set_2 Pur_ac_phosph_N Adeno_E3_CR1 Tissue_fac Interfer-bind
Other DBs
NCBI-GeneID: 116658
NCBI-ProteinID: NP_446331
RGD: 621361
Ensembl: ENSRNOG00000005652
UniProt: Q62845 A6IBJ8
Position
4:140180696..141177771
AA seq 1026 aa
MRLPWELLVLQSFMLCLADDYTLHGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHI
RWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDSGTYQCIATNSFGTIVSREAKLQFAY
LENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEHPSYQDNRRFVSQETGNLY
IAKVEKADVGNYTCVVTNTVTSHQVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKG
STVKLECFALGNPVPTILWRRADGKPIARKARRHKSSGILEIPNFQQEDAGSYECVAENS
RGKNIAKGQVTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRE
RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIYASAELSVIAESPDFSRTLLKRVTLVK
VGGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIINVTKSDAGSYTCIAT
NHFGTASSTGNVVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLI
DFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPP
EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVSTVPELVDGKTFTAT
VVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITW
ETVPEELQNGRGFGYVVAFRPHGKMIWMLTVLASADASRYVFRNESVRPFSPFEVKVGVF
NNKGEGPFSPTTLVYSAEEEPTKPPASIFARSLSATDIEVFWASPIGKNRGRIQGYEVKY
WRHDDKEENARKIRTVGNQTSTKITNLKGNALYHLSVKAYNSAGTGPSSAAVNVTTRKPP
PSQPPGNIIWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTSVIETNKTSVEL
SLPFDEDYIIEIKPFSDGGDGSSSEQIRIPKISNSYARGSGASTSNACTLSAISTIMISL
TARSSL
NT seq 3081 nt   +upstreamnt  +downstreamnt
atgaggttgccatgggaactgctagtgctgcaatcattcatgttgtgccttgcagatgac
tacacactacatggcccagtttttgttcaagagccaagtcatgtcatgtttcctttggat
tctgaggagaaaaaagtgaaactgagttgcgaagttaaagggaatccaaagcctcacatc
aggtggaagttaaatggaacagatgttgacattggtatggatttccgctacagtgttgtt
gaaggcagcttgttgatcaataaccccaataaaacccaagattctggaacgtaccaatgc
atagcaacaaactcgtttggaacaattgtaagcagagaagcaaagcttcagtttgcatat
cttgaaaactttaagacaagaacaagaagcacagtgtcagtccgtcgaggtcagggaatg
gtcctcctgtgcggcccgccaccccattctggagagctgagctacgcctggatcttcaat
gaacacccttcctatcaggataaccgccgctttgtttctcaagagactggcaatctgtat
attgccaaggtggaaaaagctgacgttggtaattatacgtgtgtggttaccaatactgtg
accagccaccaggtcctgggaccgcctacaccactaatcctgagaaatgatggggtgatg
ggtgaatatgaacccaaaatagaagtacagtttccagaaactgtcccggctgagaaagga
tcaacagtcaagctggaatgctttgccttaggaaacccagtcccaactattctatggaga
agagctgatgggaagccgatagcaaggaaagccagaagacacaagtccagtggaattctg
gaaattcccaattttcagcaggaagatgctggttcctatgaatgtgtggccgaaaactcc
agaggcaaaaacatagcaaagggacaggtgactttttatgctcaacctaactgggttcaa
ataataaatgatatccacgtggccatggaagagagtgtcttctgggaatgtaaagcaaat
gggaggcccaagcctacctataggtggcttaaaaatggtgacccactgttaacacgggag
agaatacagatcgagcaaggaacactcaacataacaatagtgaatctctcagatgccggc
atgtaccagtgtgtggcagagaataaacatggagttatctatgccagcgctgaacttagt
gtaatagctgaaagtccagatttttcgagaacactcttaaaaagagtaacacttgtcaaa
gtgggtggtgaagttgtcattgagtgcaagccgaaagcatccccaagacctgtctacacc
tggagaaagggaagagaaatattaagagaaaatgaaagaattaccatttctgaagatgga
aacctcagaatcatcaatgtcactaagtctgacgctggaagttatacctgcatagccact
aaccattttggcactgccagcagcactgggaatgtggttgtgaaagacccaacaaaggtg
atggttcccccttccagcatggatgtcactgtgggagaaagcattgttcttccatgccag
gtgacacatgatcactcactggacattgtctttacttggacatttaatggacacttgata
gactttgacaaagatggagaccactttgaaagagttggagggcaggattcagctggtgat
ttgatgatccgaaacatccaactgaagcatgctgggaaatatgtctgcatggtccaaaca
agtgtggacaaactctctgctgctgcggacctgattgtaagaggtcctccaggtcctcct
gaggctgtgaccatagacgaaatcacagacaccactgctcagctgtcctggagacctgga
cctgacaaccacagccccatcaccatgtatgtcatccaagctaggactccattctccgtg
ggctggcaagcagtcagtacagttccagaactcgttgatgggaagacattcacagcaact
gtggtgggtttgaacccctgggttgaatatgaattccgcactgttgcagctaatgtgatt
ggcattggggaacccagcaggccctcagagaaacggaggactgaagaggctctccccgaa
gtcaccccggctaacgtcagtggtggtggaggcagcaagtctgaactggttataacctgg
gagacagtccctgaggaattacagaatggcagaggctttggttacgtggtagccttccgg
ccacatggcaaaatgatctggatgctgacagtgctggcttcagctgatgcctccagatac
gtgttcaggaatgaaagcgtgcgtccattctctccctttgaggttaaagtgggtgtcttc
aataacaaaggggaaggccctttcagtcccaccaccctggtgtattctgctgaagaagaa
cccaccaagccaccagccagtatctttgccaggagtctttctgccacagatatcgaagtt
ttctgggcctcccctattgggaagaacaggggacggattcaaggttatgaggtaaaatat
tggagacatgatgataaggaagaaaatgctagaaaaatacgaacagttggaaaccagaca
tctacgaaaatcaccaacttgaaagggaatgctctgtaccacctatctgtcaaggcttat
aactcagctgggacaggaccctccagtgcagcagtcaatgtcacgaccagaaagccacca
ccaagccaaccccctggaaacatcatatggaattcatcggactccaaaattatcctgaac
tgggatcaagtgaaggccctggataatgagtcagaagtaaaaggatacaaagtcttgtac
cgatggaacaggcaaagcagtacatctgtcattgaaacgaacaaaacgtcagtggagctt
tctctacctttcgatgaagactacatcatagagatcaagccattcagtgacggaggagat
ggcagcagcagtgagcagatccgaatcccaaagatatcaaattcctatgcaagaggatct
ggggcttctacctccaatgcgtgtacactgtcagccatcagtacaataatgatttctctc
acagccaggtctagtttatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (16)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (13)   
DNA sequence (15)   
   RefSeq(nuc) (13)   
   GenBank (1)   
   EMBL (1)   
Protein domain (15)   
   Pfam (15)   
All databases (55)   

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