KEGG   Rattus norvegicus (rat): 116659
Entry
116659            CDS       T01003                                 
Symbol
Dync1i2
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2 isoform 2
  KO
K10415  dynein cytoplasmic 1 intermediate chain
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04145  Phagosome
rno04814  Motor proteins
rno04962  Vasopressin-regulated water reabsorption
rno05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    116659 (Dync1i2)
  09142 Cell motility
   04814 Motor proteins
    116659 (Dync1i2)
 09150 Organismal Systems
  09155 Excretory system
   04962 Vasopressin-regulated water reabsorption
    116659 (Dync1i2)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    116659 (Dync1i2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    116659 (Dync1i2)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    116659 (Dync1i2)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   SAC (spindle assembly checkpoint) factors
    Motor proteins
     Dynein complex
      116659 (Dync1i2)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dyneins
     116659 (Dync1i2)
SSDB
Motif
Pfam: Dynein_IC2 WD40 ANAPC4_WD40 Rrn6_K-rich
Other DBs
NCBI-GeneID: 116659
NCBI-ProteinID: NP_001257553
RGD: 620174
Ensembl: ENSRNOG00000009781
UniProt: A6HM44 F7FJ03
Position
3:76441621..76492782
AA seq 632 aa
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAAVSVQEESDLEKKRREA
EALLQSMGLTTDSPIVPPPMSPSSKSVSTPSEAGSQDSGDGAVGSRTLHWDTDPSALQLH
SDSDLGRGPIKLGMAKITQVDFPPREIVTYTKETQTPVTAQPKEDEEEEDDVAAPKPPVE
PEEEKILKKDEENDSKAPPHELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFD
YSGRDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEEAP
HEPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNK
RTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH
KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHA
AVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGM
GRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVP
RNDEWARFGRTLAEINASRADAEEEAATRIPA
NT seq 1899 nt   +upstreamnt  +downstreamnt
atgtcagacaaaagtgaattaaaagctgagttggaacgtaagaagcaacggttggcccaa
atcagagaagaaaagaagaggaaagaagaggaaaggaaaaaaaaagaaactgatcagaag
aaggaagctgcagtctctgtgcaggaagagtctgaccttgaaaagaagagaagagaagcc
gaagccttgcttcagagcatggggctaactacagactccccaattgtccctcctcccatg
tctccatcctccaagtcggtgagcacgccaagtgaagctggaagccaggactctggagat
ggcgccgtgggatctaggacgctgcactgggatacagatccatcagctcttcagctccac
tcagattccgatttgggacgaggacctattaaacttggaatggccaaaattactcaagtc
gactttccccctcgagaaatcgtcacatatacaaaggaaactcagaccccggttacagct
caacccaaagaagatgaggaggaggaagatgacgtagcagctcctaagcctcctgttgaa
cctgaagaagagaaaattttaaaaaaagacgaagagaatgatagcaaagctccccctcat
gaactaactgaagaagaaaagcaacaaattttacactcagaagaatttttaagtttcttt
gaccattctacaagaattgtagaaagagccctctctgagcagattaacatcttctttgac
tacagtgggagagatttggaagacaaagaaggggagattcaagcaggtgctaagctgtca
ttaaatcgacagttttttgatgagcgttggtcaaagcatcgagttgttagttgcttggat
tggtcatcccagtatccagaattacttgtggcttcctataataacaatgaagaggctcct
catgagcctgatggtgtggccctcgtatggaatatgaagtacaagaaaactaccccagag
tacgtgttccactgccagtcagctgtaatgtctgctacatttgcaaaatttcatccaaat
cttgttgttggaggtacatactcaggccaaattgtgctttgggataaccgtagcaataaa
agaacccccgtccagagaacaccactgtcagctgctgcacacacacaccctgtctactgt
gtaaatgttgttggaacacaaaatgctcataatctgattagcatctctactgatggaaaa
atttgctcctggagcttagacatgctttcccatccacaggatagcatggagttggttcat
aaacagtcaaaggcagtagctgtaacatctatgtctttccctgttggagacgtcaacaac
tttgttgtgggcagtgaagaaggttctgtgtatacagcatgccgccatggcagcaaagcc
ggaatcagtgagatgtttgagggacaccagggacccatcacgggaatccactgtcacgca
gctgttggcgcagtagacttctcacatctgttcgtcacttcgtcttttgactggacagta
aaactttggacaactaagaataacaagcctttgtactcatttgaagataattcagactat
gtctatgatgttatgtggtcacccacccacccagccctgtttgcctgtgtggatggcatg
gggagactggatctatggaatctcaacaatgacacagaggtgccgactgccagcatttct
gtggagggcaaccctgcccttaaccgtgtgagatggacccactcgggaagagagatcgcc
gtgggtgattctgaaggacagattgtcatatatgatgtgggcgagcagatcgctgttccc
cgaaatgatgaatgggcaagatttggccgaacactcgcagagattaacgcaagccgagct
gatgcagaggaggaagcggctacccggattcctgcctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (17)   
   UniProt (2)   
   RefSeq(pep) (15)   
DNA sequence (31)   
   RefSeq(nuc) (15)   
   GenBank (8)   
   EMBL (8)   
Protein domain (4)   
   Pfam (4)   
All databases (66)   

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