KEGG   Rattus norvegicus (rat): 116666
Entry
116666            CDS       T01003                                 
Symbol
Lman1
Name
(RefSeq) protein ERGIC-53 precursor
  KO
K10080  lectin, mannose-binding 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    116666 (Lman1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    116666 (Lman1)
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:rno04091]
    116666 (Lman1)
Membrane trafficking [BR:rno04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   ER-Golgi intermediate compartment (ERGIC) proteins
    116666 (Lman1)
Lectins [BR:rno04091]
 L-type lectins
  116666 (Lman1)
SSDB
Motif
Pfam: Lectin_leg-like Bact_lectin Lectin_legB ATG17_like KxDL Golgin_A5 PRP1_N DUF4407
Other DBs
NCBI-GeneID: 116666
NCBI-ProteinID: NP_446338
RGD: 71020
Ensembl: ENSRNOG00000024470
UniProt: Q62902
Structure
Position
18:complement(61778971..61800960)
AA seq 517 aa
MAVSRRRGPQAGAQSFFCALLLSFSQFVGSDGMGGDAAAPGAAGTQAELPHRRFEYKYSF
KGPHLVQSDGTVPFWAHAGNAIPSADQIRIAPSLKSQRGSVWTKTKAAFENWEVEVTFRV
TGRGRIGADGLAIWYTENQGLDGPVFGSADMWNGVGIFFDSFDNDGKKNNPAIVVVGNNG
QINYDHQNDGATQALASCQRDFRNKPYPVRAKITYYQKTLTVMINNGFTPDKNDYEFCAK
VENMVIPTQGHFGISAATGGLADDHDVLSFLTFQLTEPGKEPPTPEKDISEKEKEKYQEE
FEHFQQELDKKKEEFQKGHPDLQGQPADDIFESIGDRELRQVFEGQNRIHLEIKQLNRQL
DMILDEQRRYVSSLTEEISRRGAGTPGQPGQVSQQELDTVVRTQLEILRQVNEMKNSMRE
TMRLVSGVQHPGSAGVYETTQHFMDIKEHLHIVKRDIDSLAQRSMSSNEKPKCPDLPAFP
SCLSTVHFVIFIVVQTVLFIGYIMYRTQQEAAAKKFF
NT seq 1554 nt   +upstreamnt  +downstreamnt
atggcggtgtccaggcggcggggtccccaggctggagcgcagtcgttcttctgcgccctg
ctgctgtctttcagccaattcgtcgggagcgacggcatgggaggagatgctgcggctccc
ggcgccgcaggcacccaggccgagttgccacaccgccgtttcgagtacaaatacagcttt
aaggggccgcatctggtgcagagcgatgggaccgtgcccttttgggcccacgcggggaat
gctattccaagtgcagatcagatccgaatagcaccgtccttaaagagccaaagaggttcc
gtgtggaccaaaacaaaagcagccttcgagaactgggaagtggaagtgacattccgagtg
accggaagaggtcgaattggagctgatggcttagcaatttggtatacagaaaaccaaggc
ttggacggccctgtgtttggatcagctgatatgtggaatggtgttggaatattttttgat
tcttttgacaatgacggaaagaaaaacaatcctgctatagtagttgtaggcaacaatgga
caaatcaattatgaccaccaaaatgatggtgccactcaagccttagcgagttgtcagagg
gacttccgtaataaaccctatcctgtccgggcaaagattacctattaccagaaaacactg
acggtcatgatcaataatggctttacaccagataaaaatgattatgaattctgtgccaaa
gtggaaaatatggttatccccacgcaagggcattttgggatatctgctgcaacaggaggt
cttgcagatgaccacgatgttctctctttcctgactttccaactaaccgagcccggaaaa
gagccacctacgccagaaaaagacatttcagaaaaagaaaaggaaaagtatcaagaggag
tttgaacacttccagcaagaattagacaagaagaaggaggaattccagaagggccaccct
gacctccaggggcagccagcggatgacatctttgagagcataggggatcgggagctgaga
caagtgtttgaaggacaaaatcgcattcatctggagatcaagcaacttaaccggcagctg
gatatgattctcgatgaacagaggagatacgtgtcttctctgacagaggagatttccagg
agaggagcagggaccccaggacagcctgggcaggtctcccaacaggaactggacactgtt
gtgaggacccagctggagattttgagacaagtgaatgagatgaagaactccatgcgtgag
accatgcggctggttagtggcgtccagcacccaggctcggccggcgtctacgagacaacc
cagcacttcatggacatcaaggagcacctgcacatcgtgaagagagatatcgacagcctc
gcgcagcgcagcatgtcatctaatgaaaaaccaaaatgcccagatctaccagcattcccg
tcgtgtctgtccacagtccactttgtgatatttatagtggtgcagacggtgttgttcatt
ggctacatcatgtacaggactcagcaagaagcagctgccaaaaaattcttctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
3D Structure (2)   
   PDB (2)   
Protein domain (8)   
   Pfam (8)   
All databases (31)   

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