KEGG   Rattus norvegicus (rat): 116673
Entry
116673            CDS       T01003                                 
Symbol
Sdc3
Name
(RefSeq) syndecan-3 precursor
  KO
K16337  syndecan 3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04514  Cell adhesion molecules
rno04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    116673 (Sdc3)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    116673 (Sdc3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:rno00535]
    116673 (Sdc3)
Proteoglycans [BR:rno00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   116673 (Sdc3)
SSDB
Motif
Pfam: Syndecan
Other DBs
NCBI-GeneID: 116673
NCBI-ProteinID: NP_446345
RGD: 621486
Ensembl: ENSRNOG00000011927
UniProt: P33671 G3V9B7 A6ISP8
Position
5:148249792..148282524
AA seq 442 aa
MKPGPPRRGTAQGQRVDTATHGPGARGLLLPPLLLLLLAGRAAGAQRWRNENFERPVDLE
GSGDDDSFPDDELDDLYSGSGSGYFEQESGLETAMRFIPDIALAAPTAPAMLPTTVIQPV
DTPFEELLSEHPGPEPVTSPPLVTEVTEVVEEPSQRATTISTTTSTTAATTTGAPTMATA
PATAATTAPSTPAAPPATATTADIRTTGIQGLLPLPLTTAATAKATTPAVPSPPTTVATL
DTEAPTPRLVNTATSRPRALPRPVTTQEPEVAERSTLPLGTTAPGPTEVAQTPTPESLLT
TTQDEPEVPVSGGPSGDFELQEETTQPDTANEVVAVEGAAAKPSPPLGTLPKGARPGLGL
HDNAIDSGSSAAQLPQKSILERKEVLVAVIVGGVVGALFAAFLVTLLIYRMKKKDEGSYT
LEEPKQASVTYQKPDKQEEFYA
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgaagcccgggccgccgcgccgcgggaccgcacaggggcagcgcgtggacaccgccacc
catgggcccggggcccgcgggttgttactgccaccgctgctgctgctgttgctggccggc
cgcgccgcgggggctcaacgctggcgcaatgagaacttcgagaggccggtggatcttgag
ggctcaggggacgacgactcatttcctgatgatgaactggatgacctctactcggggtcg
ggctctggctacttcgagcaggagtccggccttgagacagccatgcggttcattcctgac
atagccctggctgcacccaccgcacctgccatgctacccacgaccgttatccagcccgtg
gataccccgtttgaggaactcctttctgagcatcccggccccgaaccagtcaccagtccc
ccactggtgacagaggtgacagaagttgtagaagagcccagtcagagagccaccactatc
tccaccaccacatctaccactgcagccaccaccacaggggccccaactatggccacagca
cctgctacagcagccaccactgcccctagcactcccgcggcaccccctgccacggccacc
acggctgacataaggaccaccggcatacaagggctgctgcctcttcccctgaccacggct
gccacagccaaggccactaccccagcagtaccctcaccacccactactgtggctaccttg
gacacagaggccccgacacctaggctggtcaacacagctacctctcggccacgagccctt
cctcggccagtcaccacccaggagcctgaagttgctgagaggagtaccctgccgttgggg
accaccgctcctggacccacagaggtggctcagaccccaactccagagtcccttctgacc
acgacccaggatgagccagaggtgccagtaagcggggggcccagcggggactttgagctg
caagaagagaccacacagccagacacagccaatgaagtggtggcggtggaaggagccgcg
gccaagccatcacctccactggggacactacccaagggtgcccgcccaggccttggcctc
cacgacaatgccatcgactcgggcagctctgctgcccagctccctcagaagagcatacta
gagcggaaggaggtgctcgtagctgtgatcgtaggtggcgtggtgggcgccctcttcgct
gccttcctggtcacgttgctcatctaccgcatgaagaagaaggacgaaggcagctacacc
ttggaagagcccaagcaggcaagcgtcacataccagaagcccgacaagcaggaggagttc
tatgcttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (22)   

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