KEGG   Rattus norvegicus (rat): 116690
Entry
116690            CDS       T01003                                 
Symbol
Nfasc
Name
(RefSeq) neurofascin isoform 1 precursor
  KO
K06757  neurofascin
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    116690 (Nfasc)
SSDB
Motif
Pfam: Ig_3 I-set ig Ig_2 fn3 Bravo_FIGEY V-set Ig_5 V-set_CD47 C2-set_2 BiPBP_C DUF4998
Other DBs
NCBI-GeneID: 116690
NCBI-ProteinID: NP_001153786
RGD: 620911
Ensembl: ENSRNOG00000030515
UniProt: P97685
Structure
Position
13:complement(46549369..46735989)
AA seq 1240 aa
MARQQAPPWVHVALILFLLSLGGAIEIPMDPSIQNELTQPPTITKQSVKDHIVDPRDNIL
IECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFA
RNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM
EPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVA
ERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKA
LRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRA
NGNPKPTVQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLAN
AFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHV
YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQ
LECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQ
DLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITD
YVVQFEEDQFQPGVWHDHSKFPGSVNSAVLHLSPYVNYQFRVIAVNEVGSSHPSLPSERY
RTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWNNVT
VWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPETVIGYSGEDLPSAPRRFRVRQPNLET
INLEWDHPEHPNGILIGYTLRYVPFNGTKLGKQMVENFSPNQTKFSVQRADPVSRYRFSL
SARTQVGSGEAATEESPTPPNEATPTAAPPTLPPTTVGTTGLVSSTDATALAATSEATTV
PIIPTVVPTTVATTIATTTTTTAAATTTTTTESPPTTTTGTKIHETAPDEQSIWNVTVLP
NSKWANITWKHNFRPGTDFVVEYIDSNHTKKTVPVKAQAQPIQLTDLFPGMTYTLRVYSR
DNEGISSTVITFMTSTAYTNNQTDIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYP
VREKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEG
QFNEDGSFIGQYTVRKDKEETEGNESSEATSPVNAIYSLA
NT seq 3723 nt   +upstreamnt  +downstreamnt
atggccaggcagcaggcgccaccctgggtccacgtagccctcatcctcttcctcctcagc
ctcggaggggccattgagattccgatggatccaagcattcagaatgagctgacccaaccc
ccaacgatcaccaagcagtcggtgaaggaccacatcgtggacccccgagataacatcctg
attgaatgtgaagctaaagggaaccccgcccccagtttccactggactcgcaacagcagg
ttcttcaacattgccaaggacccacgggtgtccatgaggaggaggtctgggaccttggtg
atcgacttccgcagtggtgggcggcctgaggagtacgaaggggagtaccagtgctttgcc
cggaacaaattcggcacagctcttagcaaccgcatccgcctgcaggtgtccaaatctccc
ctgtggcccaaggaaaacctagaccccgtcgtggttcaagagggtgcccccttaaccctg
cagtgcaaccccccacctggcctcccatcccccgtcatcttctggatgagcagctccatg
gagcccatcacccaggacaagcgtgtctcccagggtcacaacggggacctgtacttctcc
aacgtcatgctgcaggacatgcagaccgactacagctgcaatgcacgcttccacttcacc
cacaccattcagcagaagaatcccttcaccctcaaagtcctcaccacccgaggagttgcg
gaaagaacacctagcttcatgtatccccagggcacgtcaagcagtcagatggtactgcgc
ggcatggacctgctgctggagtgcattgcctctggggtcccaacaccagatattgcatgg
tacaagaaaggtggggacctcccatctgacaaggccaagttcgagaattttaacaaggct
ctgcgcatcaccaatgtctctgaagaggactctggggagtatttctgcctggcctccaac
aagatgggcagcatccggcacacgatctcggtgagagtaaaggctgccccatactggctg
gatgagcccaagaacttgatcctggctcctggtgaagatgggaggctggtgtgtcgagcc
aatgggaacccgaagccgaccgtccagtggctggtgaatggagaccctttgcaatcggca
ccacccaaccccaaccgtgaggtggccggagacactatcatcttccgggacactcagatc
agcagcagggcagtgtaccagtgtaacacatccaacgaacatggctacctgctggccaat
gccttcgtcagcgtattagatgtaccccctcggatgctgtctccccggaaccagctcatc
agggtgatcctttacaaccggacgcgactggactgtccgttctttgggtctcccattcca
acactccgatggtttaagaatgggcaaggaagcaacctggatggtggtaactaccacgtc
tacgaaaatggcagcctggaaatcaagatgattcgcaaagaggaccaaggcatctacacc
tgtgtggccaccaacatcctgggaaaagctgaaaatcaagtccgcctggaggtcaaagac
cccaccaggatctacaggatgcctgaagaccaggtggccaagaggggcaccacagtgcag
ctggagtgccgtgtgaagcatgacccctccttgaaactcacagtctcctggctgaaggat
gacgagccactctacattggaaacaggatgaaaaaggaagatgactccctgaccatcttc
ggagtggcagagcgggaccaaggcagttacacgtgcatggccagcaccgagctggaccag
gacctggcaaaggcctacctcactgttctagctgatcaggccactccgactaaccgtttg
gctgccctgcccaaagggcggccagaccgacccagggacctggagctcactgacctggcg
gaaaggagtgtgaggctgacctggatcccgggggatgataacaacagtcccatcacagac
tacgttgtccagtttgaagaggaccagttccagccaggagtctggcatgaccactccaag
ttcccaggcagtgtcaactcagccgtcctccatctgtccccgtatgtcaactatcagttc
cgagtcatcgctgtcaacgaggttgggagcagccaccccagccttccatccgagcggtac
cgaacaagcggggcaccccctgaatccaaccccagtgatgtgaagggcgaagggacacga
aaaaacaatatggagatcacatggacgcctatgaatgctacctccgcctttggccccaac
ctgcgctacattgtcaagtggcgacggagagaaacccgagagacttggaacaatgtcacc
gtgtggggctctcgctatgtggtggggcagacccctgtctacgtaccctatgagatccga
gtccaggctgaaaatgactttgggaaaggcccggagcctgaaaccgtcattgggtactcg
ggggaagatttacccagtgcccccaggcgtttcagagtccgacagcccaacctggagacc
atcaacctggaatgggatcacccagagcaccccaacgggatcctgattggatacacgctc
agatacgtgccctttaatggaaccaaactgggaaagcagatggtggaaaacttctctccc
aatcagaccaagttctcggtgcagagagcagaccccgtgtcccgttaccgcttctccctc
agtgccaggacgcaggtgggctctggagaagcagccacggaggagtccccaacacctcca
aatgaagctactccaactgcagctcctcccacattgcccccgactaccgtgggtaccaca
ggccttgtgagcagtactgatgctactgcccttgctgccaccagtgaagccacaacagtt
cccatcatcccaaccgtcgtacctaccaccgtcgccaccaccattgccacaactactaca
accactgccgccgccaccaccactaccaccacggagagtcctcccactaccaccactggg
actaagattcacgaaaccgcccccgacgagcagtccatttggaacgtcacggtgctcccc
aacagtaaatgggccaacatcacctggaagcacaatttcaggcctggaactgactttgtg
gttgagtacatcgacagcaaccatacgaaaaaaactgtccctgttaaggcccaagcccag
cccatacagctgacagacctctttcccgggatgacgtacacgttgcgggtgtattcccgg
gacaacgagggcatcagcagtaccgtcatcacctttatgaccagtacagcttacaccaac
aaccagactgacatcgccacccagggctggttcatcgggctcatgtgtgccattgccctt
ctggtgctgatcctgcttatcgtctgcttcatcaagaggagtcgtggcggcaagtaccca
gtgcgagaaaagaaggatgtccccttgggccctgaagaccccaaagaagaagatggttca
tttgactacagtgacgaggacaacaagcccctgcagggcagccagacatctctggacggc
accatcaagcagcaggagagtgacgacagcctagtggactacggcgagggtggcgagggc
cagttcaacgaagatggctcctttattggccagtacactgtcagaaaggacaaggaggag
accgagggcaatgagagctcagaggccacatctccagtcaatgccatctattccctggcc
tga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (26)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (24)   
DNA sequence (34)   
   RefSeq(nuc) (24)   
   GenBank (5)   
   EMBL (5)   
3D Structure (1)   
   PDB (1)   
Protein domain (12)   
   Pfam (12)   
All databases (82)   

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