KEGG   Rattus norvegicus (rat): 116694
Entry
116694            CDS       T01003                                 
Symbol
Capn9
Name
(RefSeq) calpain-9
  KO
K08578  calpain-9 [EC:3.4.22.-]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rno01002]
    116694 (Capn9)
Peptidases and inhibitors [BR:rno01002]
 Cysteine peptidases
  Family C2: calpain family
   116694 (Capn9)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_8 EF-hand_5
Other DBs
NCBI-GeneID: 116694
NCBI-ProteinID: NP_001258069
RGD: 70965
Ensembl: ENSRNOG00000018480
UniProt: O35920
Position
19:69446847..69483810
AA seq 690 aa
MPYLHRSLRPQPQPVPRDARTVHSSGHSFEQLRQSCLQSGTLFEDADFPASNSSLFYSER
PQVPFVWKRPGEIVENPEFILGGATRTDICQGELGDCWLLAAIASLTLNQKALARVVPQD
QGFGSGYAGIFHFQFWQHSEWLDVVIDDRLPTFRDRLVFLHSADHNEFWSALLEKAYAKL
NGSYEALKGGSAIEAMEDFTGGVAENFQIREAPEDFYEILEKALRRGSLLGCSIDTLNAS
ESEARTPLGLIKGHAYTVTGLDQVNFHGQRIKLIRVRNPWGQVEWNGPWSDSSPEWRSMS
LEEQKRLGHTALDDGEFWMAFEDFKTHFDKVEICNLTPDALEDNTLHKWEVTIHQGSWVR
GSTAGGCRNFLDTFWTNPQIKLSLTERDEGQEGCTFLAALMQKDRRRLKRFGANMLTIGY
AIYQCPDKDGHLNRDFFRYHASLARSKTFINLREVSGRFQLPPGDYILIPSTFEPHQEAD
FCLRIFSEKKAVTQDLDENIDIDLPELPKPTPQEEETEEERQFRALFRRIAGEDMEVSAE
ELEYVLNAVLQKKTALKFKRLSLLSCRNIISLMDTSGNGKMEFEEFRVFWDKLRYWMDLF
LQFDVDKSGTMSSYELRTALKAAGFQLGSHLLQLIVLRYADENLQLDFDDYLNCLVRLEN
ASRVFQCLSVKNKDFIHLNINEFINLTMNI
NT seq 2073 nt   +upstreamnt  +downstreamnt
atgccttacctgcatcggtccctgagaccccagccacagccagtccccagggatgccagg
actgtccactcctcgggccacagctttgagcagctgaggcaaagctgtctgcagtcgggc
accttgtttgaggatgctgacttccctgccagcaatagttcactgttctacagcgagagg
ccccaggtcccctttgtgtggaagcggccaggggaaattgtggaaaacccagaattcatt
ctgggaggggccaccaggaccgacatctgccaaggggaactgggagactgctggctcctg
gccgccattgcctccctaaccctcaatcagaaagcactggccagagtggtaccccaggac
caaggatttggttctggctatgctgggatatttcacttccagttctggcagcacagtgag
tggctggacgtggtgattgatgaccgcctgcctacctttcgggatcgcctggtcttcctc
cactctgccgaccacaatgagttctggagcgcactgctggagaaagcctatgccaagctg
aacgggagttacgaggcactgaaggggggcagcgccatcgaagccatggaggacttcacc
gggggtgtggctgagaacttccaaatccgagaggcaccagaggatttctacgagattctg
gagaaggccctgcggcgtggttccttgctgggctgctccatagataccctgaatgcctca
gaatctgaagcccgcacacctttgggcctcattaagggccatgcctacactgtgactgga
ctcgaccaggtaaacttccacggccagagaatcaagctcatcagagtccgtaacccttgg
ggccaggtggaatggaacgggccatggagcgacagctctcctgagtggcgctccatgagc
ctggaggagcagaagcgcctaggtcacaccgcccttgacgatggagaattctggatggca
tttgaggacttcaagacccattttgacaaagtggagatctgcaacctcacgcctgatgcc
ctggaggacaacaccctccacaagtgggaggtgaccatccaccaaggaagctgggttcgt
ggctccaccgccggcggctgccgcaacttcctggacaccttctggaccaacccacagata
aagctgtctctgacagagagggatgagggccaggagggctgcactttcctagcagccttg
atgcagaaagaccgcaggaggctcaagaggtttggtgccaacatgctgaccattggctat
gccatttaccagtgcccagacaaggacggacacctgaatagggactttttcaggtaccat
gcctctctggcccgaagtaagacattcatcaacttgagagaagtctcaggccgcttccag
ctgcccccgggagactatatcctcatccccagcacctttgagccacaccaggaggctgac
ttctgcctgagaatcttctctgagaagaaagctgttactcaggacctggatgagaacata
gacattgaccttcctgagcttccaaagccgacaccacaggaggaggaaaccgaagaggag
cggcagttccgggccctgttccgtcgaattgctggtgaggacatggaggtgtcagcagaa
gagcttgaatatgttctaaatgctgttctgcaaaagaaaacagccctcaagttcaagagg
ctgagcctgctttcctgcagaaacattatctccctgatggacaccagcggcaacgggaag
atggagttcgaagagttccgggtgttctgggacaagctgaggtactggatggacctgttt
ctccagttcgatgtggacaagtccggcaccatgtcttcctatgagttgcggacagcactg
aaagctgcaggctttcagctgggtagccatctcctgcagctgatcgtcctcaggtatgca
gacgagaacctccagctggatttcgatgactacctcaactgcctggtgcggctggagaat
gcgagccgggtgttccagtgtctcagtgtgaagaacaaggacttcatccatctcaacata
aacgagttcatcaacttgaccatgaacatctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

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