KEGG   Rattus norvegicus (rat): 116697
Entry
116697            CDS       T01003                                 
Symbol
Pabpn1
Name
(RefSeq) polyadenylate-binding protein 2
  KO
K14396  polyadenylate-binding protein 2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03015  mRNA surveillance pathway
rno05164  Influenza A
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    116697 (Pabpn1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    116697 (Pabpn1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    116697 (Pabpn1)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     116697 (Pabpn1)
SSDB
Motif
Pfam: RRM_1 Seryl_tRNA_N
Other DBs
NCBI-GeneID: 116697
NCBI-ProteinID: NP_001128480
RGD: 619928
Ensembl: ENSRNOG00000042195
UniProt: A6KGX0 G3V7Z8
Position
15:32337955..32342700
AA seq 302 aa
MAAAAAAAAAAGAAGGRGSGPGRRRHLVPGAGGEAGEGDPGGAGDYGNGLESEELEPGEL
LPEPEPEEEPPRPRAPPGAPGPGPGSGAPGSQEEEEEPGLVETDPGDGAIEDPELEAIKA
RVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIYVGNVDYGAT
AEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKV
IPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYSGFNSRPRGRIYRGRARATSWYS
PY
NT seq 909 nt   +upstreamnt  +downstreamnt
atggcggcggcggcggcggcggcagcagcagcgggggctgcgggcggtcggggctccggg
ccggggcggcggcgccatcttgtgcccggggccggtggggaggccggggagggggacccg
gggggcgcaggggactacgggaacggcctggagtctgaggagctggagcctggggagctg
ctgccagagcccgagcccgaagaggagccgccccggccccgcgcccctccgggagctccg
ggtcctgggcccggctcgggagcccccggcagccaggaggaggaggaagagccgggactg
gttgagaccgaccccggggacggcgccattgaggacccggagctagaagcgatcaaagct
cgagtcagggagatggaggaagaggctgagaagctaaaggagctacaaaacgaggtagag
aaacagatgaatatgagtccacccccaggcaatgctggcccagtgatcatgtctcttgag
gagaagatggaggctgatgcccgttccatctacgttggcaatgtggactatggtgcgaca
gcagaagagctggaggcccattttcacggctgcggttcagtcaaccgggtgactatactc
tgtgacaaatttagtggccatcccaaagggtttgcatatatagagttctcagacaaagag
tcagtgaggacgtccctggccttagatgagtccctgtttagaggaagacaaatcaaggtg
attcccaagcgaaccaacagaccaggcatcagcacaacagaccggggcttcccgcgtgcc
cgataccgcgcccggactaccaattacaacagctccagatctcgattctacagtggtttt
aacagcaggccccggggtcgaatctacaggggccgggctagagcgacatcatggtattcc
ccttactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (10)   
   RefSeq(nuc) (2)   
   GenBank (4)   
   EMBL (4)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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