KEGG   Rattus norvegicus (rat): 116782
Entry
116782            CDS       T01003                                 
Symbol
Pcdhgc3
Name
(RefSeq) protocadherin gamma-C3
  KO
K16497  protocadherin gamma subfamily C
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    116782 (Pcdhgc3)
Cell adhesion molecules [BR:rno04515]
 Cadherins
  Protocadherins
   116782 (Pcdhgc3)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_tail Cadherin_C_2 Cadherin_3
Other DBs
NCBI-GeneID: 116782
NCBI-ProteinID: NP_446395
RGD: 620746
UniProt: I6LBX8
Position
18:29884245..29919095
AA seq 934 aa
MVAEARSSGLVSPGRTVGVLLLLAALTEASTIIHYEILEEREKGFPVGNVVTDLGLDLGS
LSARRLRVVSGASRRFFEVNWETGEMFVNDRLDREELCGTLPSCTVTLELVVENPLELFS
AEVVVQDINDNNPSFPTAEMKLEISEAMAPGTRFPLESAHDPDVGSNSLQTYELSHNEYF
ALRVQTREDGTKYAELVLERALDWEREPSVQLVLTALDGGTPARSATLPIRITVLDANDN
APAFNQSLYRARVREDAPPGTRVAQVRATDLDEGLNGEIVYSFGSHNRAGVRELFALDLV
TGVLTIKGRLDFEDTKLHEIYIQAKDKGANPEGAHCKVLVEVVDVNDNAPEITVTSVYSP
VPEDAPLGTVIALLSVTDLDAGENGQVTCEVPPGLPFSLTSSLKNYFTLKTSAALDRETV
PEYNLSITARDSGTPSLSALTTVRVQVSDINDNPPQSSQSSYDVYVEENNLPGVPILNLS
VWDPDAPPNARLSFFLLEPGAETGLVGRYFTINRDNGILTTLVPLDYEDQREFQLTAHIN
DGGTPVLATNISVNIFVTDRNDNAPQVLYPRPGQSSVEVLPRGTAAGHVVSRVVGWDADA
GHNAWLSYSLMGAPNQSLFAVGLHTGQISTARPIQDTDSPRQILTVLISDNGEPLLSTTA
TLTVSVTEESPEARAEFPSGSAPREQNKNLTFYLLLSLILVSVGFAVTVLGVIIFKVYKW
KRSRDLYRAPVSSLYRTPVSSLHADAVRGGLMPPHLYHQVYLTTDSRRSDPLLKKPGAAS
PLASRQNTLRSCDPVFYRQVLGAESAPPGQQAPPNTDWRFSQAQRPGTSGSQNGDETGTW
PNNQFDTEMLQAMILASASEAADGSSTLGGGTGTMGLSARYGPQFTLQHVPDYRQNVYIP
GSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
NT seq 2805 nt   +upstreamnt  +downstreamnt
atggtcgcagaggcccggagcagcggactggtaagccccgggagaacggtgggagttttg
cttctgctagctgccttgaccgaggcttccaccatcattcactatgagatcctggaggag
agagagaaggggtttcccgtgggtaacgtggtcacggatcttggtttggatctcggcagt
ctgtcggcccgcaggctccgggtggtgtccggagctagccgtaggttctttgaggtgaac
tgggagactggagagatgttcgtcaacgatcgactggaccgagaggagctgtgtgggacg
ctgccctcctgcactgtaactctggagttggtggtagagaacccgctggagctgttcagc
gcggaagtggtggtccaggacatcaacgacaacaatccctctttccccaccgcggaaatg
aaattggagattagcgaggccatggcgccggggacgcgctttccgctcgagagcgcgcac
gatcccgatgtgggaagcaactctttacaaacctatgagctgagccacaacgagtacttt
gcgctccgcgtgcagactcgagaggacggcacgaaatacgcggagctggtcctggagcgc
gccctagattgggaacgggagccaagtgtccagttggtactgaccgcacttgatggagga
accccagctcgctccgccacccttccaattcgtatcacagtgctggacgcgaatgacaat
gctcctgccttcaatcagtctttgtatagggcgcgcgtccgggaggatgcacccccaggc
acgcgcgtcgcccaggttcgtgcaactgacctggatgagggcctcaatggagaaatcgtt
tactccttcggcagccacaatcgtgctggggtgcgggaactattcgctttagacctcgta
accggggtgctgacaatcaagggtcgcctggactttgaagacaccaaactccatgagatt
tacatccaggccaaagacaaaggtgccaatccggaaggagcgcattgcaaagtactggta
gaggttgtggacgttaatgacaatgccccggagatcacagtcacctctgtatacagccca
gtccctgaggatgctcctctggggactgtcattgctttgctcagtgtgactgatctggat
gctggagagaacgggcaggtgacctgcgaggttcccccgggtctccccttcagcctgact
tcttccctcaagaattacttcactttgaaaaccagtgcagccctggatcgtgagaccgtg
cccgaatacaatctcagtatcacagctcgagactcgggaactccctctctctcagctctt
acaacagtcagggtccaagtgtccgatatcaacgacaatcctcctcagtcatcccaatcc
tcctacgatgtgtatgtggaggaaaataacctacccggagttcctatattaaacctaagt
gtctgggaccccgacgccccgcccaatgcccgcctttctttctttctcttggaacccgga
gcggaaactggtctcgtaggtcgctatttcacaataaatcgtgacaatggaatcttgaca
accttagtacccctggactatgaggatcagagagagttccagctaaccgctcatataaac
gacggaggtaccccggttttggccaccaacatcagcgtgaacatatttgttactgaccgc
aatgacaacgccccccaggtcctgtatccccggcctggccagagttcagtggaggtgctg
cctcgaggtacagcggcgggccacgtggtctcacgggtggtaggctgggacgcagatgca
gggcacaatgcctggctctcctacagcctcatgggagcccccaaccagagcctttttgcc
gtggggcttcacacgggtcagatcagcactgcccgcccaatccaggacacagattcacca
agacagattctcacagtcttgatctcagacaatggagaaccattgctctccaccaccgcc
accctgactgtgtcagtaactgaggagtctccggaagcccgggccgagttcccttctggc
tcagctccccgagaacagaacaaaaatctcaccttttatctacttctttctctaatctta
gtctctgtgggattcgcagttacagtgttgggagtgatcatattcaaagtttacaagtgg
aagcggtctagggacctctaccgagccccagtgagctccctgtaccgaaccccagtgtcc
tccttgcacgcagacgcggtgcgaggaggcctaatgccgccgcacctgtaccatcaggtg
tacctcaccacggactctcgccgcagcgacccactgctgaagaagcctggtgcggccagc
ccactggccagccgccagaacacgctgcgaagttgtgatcccgtgttctatagacaggtg
ttgggtgcagagagcgccccccctggacagcaagccccgcccaacactgactggcgtttc
tctcaagcccagagacccggcacgagcggatcccaaaatggggatgaaaccggcacctgg
cccaacaaccagttcgatacagagatgctgcaagccatgatcttggcctctgccagtgaa
gccgctgatgggagctccactctgggagggggcactggcactatgggtttgagcgctcga
tatggaccccagtttaccctgcagcacgtgcctgactaccgccagaacgtgtacatccct
ggcagcaatgccacactgaccaacgcagctggcaaacgagatggcaaggctccggcaggc
ggcaatggcaacaagaagaagtcgggcaagaaagagaagaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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