KEGG   Rattus norvegicus (rat): 117036
Entry
117036            CDS       T01003                                 
Symbol
Lamc1
Name
(RefSeq) laminin subunit gamma-1 precursor
  KO
K05635  laminin, gamma 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04151  PI3K-Akt signaling pathway
rno04510  Focal adhesion
rno04512  ECM-receptor interaction
rno05020  Prion disease
rno05145  Toxoplasmosis
rno05146  Amoebiasis
rno05165  Human papillomavirus infection
rno05200  Pathways in cancer
rno05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    117036 (Lamc1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117036 (Lamc1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117036 (Lamc1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    117036 (Lamc1)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    117036 (Lamc1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    117036 (Lamc1)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    117036 (Lamc1)
   05145 Toxoplasmosis
    117036 (Lamc1)
  09164 Neurodegenerative disease
   05020 Prion disease
    117036 (Lamc1)
SSDB
Motif
Pfam: Laminin_EGF Laminin_N Laminin_B LOH1CR12
Other DBs
NCBI-GeneID: 117036
NCBI-ProteinID: NP_446418
RGD: 621052
Ensembl: ENSRNOG00000002680
Vega: OTTRNOG00000002096
UniProt: F1MAA7
Position
13:complement(67924872..68051986)
AA seq 1607 aa
MTGGRRAALALQLQRRLWLLLAVLAAVACWVRAAMDECADEGGRPQRCMPEFVNAAFNVT
VVATNTCGTPPEEYCVQTGVTGVTKSCHLCDAGQLHLQHGAAFLTDYNNQADTTWWQSQT
MLAGVQYPNSINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWIPYQYYSGSC
ENTYSKANRGFIRTGGDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQE
WVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNEFGK
LVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESANQCLPCDCNGRSQECYFDPELYRSTG
HGGHCTNCRDNTDGAKCERCRENFFRLGNTEACSPCHCSPVGSLSTQCDSYGRCSCKPGV
MGDKCDRCQPGFHSLTEAGCRPCSCDPSGSTDECNVETGRCVCKDNVEGFSCERCKPGFF
NLESSNPKGCTPCFCFGHSSVCTNAVGYSVYDISSTFQIDEDGWRVEQRDGSEASLEWSS
DRQDIAVISDTYFPRYFVAPAKFLGNQVLSYGQNLSFSFRVDRRDTRLSAEDLVLEGAGL
RVSVPLIAQGNSYPSETTVKYIFRLHEATDYPWRPALSPFEFQKLLNNLTSIKIRGTYSE
RSAGYLDDVTLQSARPGPGVPATWVESCTCPVGYGGQFCETCLPGYRRETPSLGPYSPCV
LCTCNGHSETCDPETGVCDCRDNTAGPHCEKCSDGYYGDSTLGTSSDCQPCPCPGGSSCA
IVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNC
NRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVT
GQCQCLPHVSGRDCGACDPGFYNLQSGQGCESCDCHALGSTNGQCDIRTGQCECQPGITG
QHCERCETNHFGFGPEGCKPCDCHHEGSLSLQCKDDGRCECREGFVGNRCDQCEENYFYN
RSWPGCQECPACYRLVKDKVAEHRVKLQELESLIANLGTGDETVTDQAFEDRLKEAEREV
TDLLREAQEVKDVDQNLMDRLQRVNNSLHSQISRLHNIRNTIEETGILAERARSRVESTE
QLIEIASRELEKAKMAAANVSITQPESTGEPNNMTLLAEEARRLAERHKQEADDIVRVAK
TANETSAEAYNLLLRTLAGENQTALEIEELNRKYEQAKNISQDLEKQAARVHEEAKRAGD
KAVEIYASVAQLTPVDSEALESEANKIKKEAADLDRLIDQKLKDYEDLREDMRGKEHEVK
NLLEKGKAEQQTADQLLARADAAKALAEEAAKKGRNTLQEANDILNNLKDFDRRVNDNKT
AAEEALRRIPAINRTIAEANEKTREAQLALGNAAADATEAKNKAHEAERIASGVQKNATS
TKADAERTFSEVTDLDNEVNGMLRQLEEAENELKRKQDDADQDMMMAGMASQAAQEAELN
ARKAKNSVSSLLSQLTDLLEQLGQLDTVDLNKLNEIEGSLNKAKDEMKVSDLDRKVSNLE
NEARKQEAAILDYDRDIAEIIKDIHNLEDIKKTLPTGCFNTPSIEKP
NT seq 4824 nt   +upstreamnt  +downstreamnt
atgacgggcggcaggcgggccgctctggccctgcagctccagcggcggctgtggctgctg
ctggctgtgctggcggccgtggcgtgctgggtccgggcggccatggacgagtgcgcggat
gagggcggccggccgcagcgctgcatgccggagtttgttaatgccgccttcaatgtgacc
gtggtggctaccaacacgtgtgggactccacccgaggagtactgcgtgcagactggagtg
accggagtcaccaagtcctgtcacctgtgcgacgccggccagctccacctgcaacacggg
gcagccttcttgaccgactacaacaaccaggccgacaccacctggtggcaaagccagact
atgctggccggggtgcagtaccccaactccatcaacctcacgctgcacctgggaaaggct
tttgacatcacttacgtgcgtctcaagttccacaccagccgcccagagagtttcgccatt
tataagcgcactcgggaagacgggccctggattccttaccagtactacagtggctcctgt
gagaacacgtactcaaaggctaaccgtggcttcatcaggacgggaggagatgagcagcag
gccttgtgtaccgatgagttcagtgacatttcccccctcaccggcggcaacgtggccttt
tcaactctggaaggaaggccgagtgcctacaactttgacaacagccccgtgctacaggaa
tgggtgacagccactgacatcagagtcacactcaatcgcctgaacacctttggagatgaa
gtattcaatgaccccaaagtcctcaagtcttactattatgcaatctcggactttgctgtg
ggtggcaggtgtaaatgtaatggacatgccagtgagtgtgtaaagaacgagtttgggaag
ctcgtgtgcaactgcaagcataacacatacggagttgactgtgaaaagtgcctgcctttc
ttcaacgatcggccgtggaggagagcaactgccgagagtgccaaccagtgcctgccttgc
gactgcaatggccgatcccaagaatgctactttgaccctgagctataccgttccactggg
cacggtggccactgtaccaactgccgggataacacagacggtgccaagtgcgagaggtgc
cgggagaacttcttccgcctggggaacactgaagcctgctctccgtgccactgcagcccc
gttggttctctcagcacgcagtgtgacagttacggcaggtgcagctgtaagcccggagtg
atgggtgacaagtgtgaccgttgccagcctgggttccattccctcaccgaggcaggatgc
aggccatgctcctgcgacccttctggcagcaccgacgaatgtaatgttgaaacaggaaga
tgcgtttgcaaagacaacgtcgaaggcttcagctgtgagagatgcaaacctggatttttt
aatctggaatcctccaatcctaagggttgcacaccctgcttctgctttgggcattcttct
gtgtgcaccaatgctgttggctacagtgtttatgacatctcctcgacctttcagattgat
gaggacgggtggcgtgtggagcagagagatggctcggaggcgtctcttgagtggtcctca
gaccggcaggatattgctgtgatctcagacacttacttccccagatactttgtcgcccct
gccaagttcctgggcaaccaggtcctgagttacgggcagaacctctcattctccttccga
gtggacagacgggacactcgcctctccgcagaggatctcgtgctggaaggagctggcttg
agagtatccgtgcccttgatcgctcagggcaactcgtaccctagcgagaccactgtgaag
tacatcttcagactccatgaagcaacagattacccttggaggcctgctctctccccattt
gaatttcagaagctcctaaacaacttgacctctatcaagatccgtggtacatacagtgag
aggagcgctggatatttggatgatgtcaccttgcaaagtgctcgccctgggcccggagtc
cccgcaacgtgggtggagtcctgcacctgtccagtggggtatggagggcagttctgtgag
acatgcctcccaggctacagaagagaaaccccaagtcttggaccttacagcccgtgtgtg
ctctgtacctgtaatgggcacagtgagacctgtgaccccgagacaggtgtctgtgactgc
agagacaatactgccggcccgcactgtgagaaatgtagcgatgggtactatggagactca
accctgggcacctcctctgactgccagccttgtccctgccctggcggctcaagttgtgcc
attgtcccaaagacaaaggaagtggtgtgcacacactgtccaactggcactgccggcaag
agatgtgagctctgtgatgacggctactttggagaccctctgggcagcaatggacccgtg
agactctgccgcccatgtcagtgcaacgacaacatagaccccaacgcagttggcaactgc
aaccgtctgactggagaatgcctgaagtgcatctataacacggctggcttctactgcgac
cggtgcaaagaagggtttttcggaaatcccctggctcccaatccagcagacaagtgcaaa
gcctgcgcctgcaatccctatggtacagtacagcagcagagcagctgtaacccagtgacc
gggcagtgccagtgtctgcctcatgtgtcaggccgggactgtggcgcttgtgaccctggc
ttctacaacctgcagagcgggcaaggctgcgagagttgtgactgccatgctttgggctcc
accaacgggcaatgtgacatccgcaccgggcagtgtgagtgtcagcccggcatcaccggt
cagcactgtgagcgctgtgagaccaaccactttgggtttggacctgaaggctgcaaacct
tgcgactgtcaccacgaaggatccctttcgctccaatgtaaggatgacggccgttgtgaa
tgcagggaaggcttcgtgggcaatcgctgtgaccagtgtgaagagaactatttctacaat
cggtcttggcctggctgccaagagtgtccggcttgttaccggctggtgaaggataaggtt
gctgagcatcgagtgaaactccaggagttggagagcctcatagcaaacctcgggactggg
gatgagacggtgacagatcaagcctttgaggacagactgaaggaagcagagagggaggtt
acagacctcctccgtgaggctcaggaagtcaaagatgtagaccaaaatctgatggatcgc
cttcagagagtaaataacagtctgcacagccaaatcagccggctgcacaatatccggaac
actatagaagagacggggatcttggctgagcgagcgcggtcccgagtggagagcacagag
cagctgattgagatcgcctccagggagctcgagaaagcaaaaatggctgccgccaatgtg
tcaatcactcagccagagtctacaggggaaccaaacaacatgaccctcttggcagaagaa
gcccgaaggcttgcagagcgtcataaacaggaagctgatgacattgtacgagtggcaaag
acagccaacgagacctcagctgaggcatataatctgcttttgaggaccctggcaggagaa
aatcaaactgcattggagattgaagagcttaacaggaagtatgaacaagcaaagaacatc
tctcaggacctggagaagcaggctgccagagtccatgaggaagccaagcgagcaggtgac
aaagccgtggagatctatgccagtgtggcccagctgacccctgtggactcggaggctcta
gagagtgaagcaaataaaatcaagaaagaagctgcagatctggaccgtctgattgaccag
aagctaaaagattacgaggaccttagggaagacatgcgaggaaaggaacatgaagtaaag
aaccttctagagaaggggaaagccgaacagcagaccgctgaccaactcctagctcgagcc
gacgctgccaaggctcttgctgaagaagctgctaaaaagggacgcaataccttacaagaa
gctaacgacattctcaacaacctgaaagattttgatagacgagtgaacgataacaagaca
gctgctgaagaagctctaaggagaattcccgccatcaaccggaccatagctgaagccaat
gagaagacaagggaggcacagctggcgctgggcaatgcagcagctgacgccacggaggcc
aagaacaaagcccacgaggcggagaggattgccagtggcgtgcagaagaatgccaccagt
accaaggcggatgcggagagaaccttctcggaagtgacagacctggataacgaggtgaat
ggcatgttgaggcagctagaggaagcggagaatgagctgaagaggaagcaagatgatgcc
gaccaggacatgatgatggcgggaatggcttcacaggctgctcaggaagctgaacttaat
gccagaaaagccaaaaactctgtcagcagcctcctcagccaactgaccgacctcttggag
cagctgggacagctggacaccgtggacctgaacaagctcaacgagatcgaaggctctctg
aacaaagccaaagacgaaatgaaggtgagcgacctggacaggaaggtgtccaacctggag
aacgaggcccggaagcaggaggcagccatcttggactatgaccgagacatagcagagatc
ataaaggacattcacaacctggaggacatcaagaagacactaccaacaggctgctttaac
accccgtccatcgagaaaccctag

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (9)   
   KEGG PATHWAY (9)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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