KEGG   Rattus norvegicus (rat): 117048
Entry
117048            CDS       T01003                                 
Symbol
Cdh17
Name
(RefSeq) cadherin-17 precursor
  KO
K06811  cadherin 17, LI cadherin
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09162 Cancer: specific types
   05226 Gastric cancer
    117048 (Cdh17)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    117048 (Cdh17)
Cell adhesion molecules [BR:rno04515]
 Cadherins
  Major cadherins
   117048 (Cdh17)
SSDB
Motif
Pfam: Cadherin Cadherin_3 RibLong Cadherin_4 RET_CLD1 He_PIG SKG6 Big_9
Other DBs
NCBI-GeneID: 117048
NCBI-ProteinID: NP_446429
RGD: 619748
Ensembl: ENSRNOG00000015562
UniProt: P55281 A6II73
Position
5:30024544..30112226
AA seq 827 aa
MVSAQLHFLCLLTLYLTGAYGQEGKFSGPLKPMTFSIFEGQEPSQIIFQFKANPPAVTFE
LTGETDGIFKIEKDGLLYHTRVLDRETRAVHHLQLAALDSQGAIVDGPVPIIIEVKDIND
NRPTFLQTKYEGSVRQNSRPGKPFMYVNATDLDDPATPNGQLFYQIVIQLPKINNVMYFQ
IDNKTGAISLTPEGSQVLDPIKNPYYNLVVSVKDMGGQNENSFSDTTSVDITVRENIWKA
PEPVEIRENLTDPHPIKITQVQWNDPGAHYSLINKEKLPQFPFSIDQEGNIYVTQPLDRE
EKDSHVFFATAKDENGKPLAYPLEIRVKVIDINDNPPTCLSQVTVFEVQENEVLGSSIGI
FAAHDMDEANNINSILKYRLVDQTPKVPSDELFLIDEYGGKVQLGKRSLKKQDSPQYNLT
VEVSDIDFKTLCSLQVNVIDINDQIPIFERSDYGSKTLSEDTAIGSTILIIQATDDDEPF
TGSSKILYKIVQGDTEGRLEVVTDPMTNTGYVKIRKPLDFETEPVTSIVFKAENPEPLVN
GIEYNASSFASFELTVTDVNEVPVFPQQIFQANVSEDTAIGTKVGTVTARDPEGLTVSYS
LKDNKRGWLKIDSVTGDIFSTAPLDRETESVYRVQVVATEVGGSSLSSTAYFHLVLMDVN
DNPPRLAKDYTGLFFCHPLSAPGSLIFEATDDDQQSVRRPKFTFALGRESLQSDWEVSKI
NGTHARLSTKHTRFEEQVYDIPILINDGGQPPMEGIVSLSVTFCQCVDGSCFRPAGNQVG
IPTVGMAVGILLTTFLVIGIILAVVFIRMRKDKVEDPQSPENKPLRS
NT seq 2484 nt   +upstreamnt  +downstreamnt
atggtctctgcccagcttcacttcctgtgtcttctcacgctttatttgactggcgcatat
ggccaagaagggaagttcagcggccccctgaaacccatgacattctctatttttgaaggc
caagaaccgagtcaaatcatattccagtttaaggccaaccctccagctgtgacttttgag
ctaacaggagagacggatggtatatttaagatagaaaaggatggacttctttatcacaca
agagtcctggacagagaaacaagggcggttcatcatctgcagcttgcagccttggattct
cagggagctatagtggatggcccagtccccatcatcatagaagtcaaggacatcaatgac
aaccgacctacatttctccagacaaaatatgaaggctcagtgaggcagaactctcgccca
ggaaagcctttcatgtatgtcaatgctacagacctggatgacccggctactcccaatggc
cagcttttttatcaaattgtcatccagcttcccaaaatcaacaatgttatgtacttccag
atcgacaacaaaacaggggcaatctcgcttaccccagaaggttctcaggtattggatcca
ataaagaatccgtactacaacctggtggtctctgtgaaggacatggggggccagaatgag
aattccttcagcgataccacatctgtggatattactgtcagagagaacatctggaaagca
ccagagcctgtggagattcgagaaaacttaactgatcctcaccccatcaaaatcactcag
gtgcagtggaatgacccaggggcccactattccttaatcaacaaggagaagctgccacag
tttccattctcgatcgaccaagaaggaaatatttacgtgactcagcctttggaccgtgag
gaaaaggactctcatgttttctttgccactgccaaggatgagaatggaaaacccctcgca
tatccactggaaattcgtgtgaaagttattgacattaatgacaacccaccgacatgtctc
tctcaagtgactgtatttgaagtccaggagaatgaagtcttgggtagtagcattgggatc
tttgctgcccacgatatggatgaagctaacaatatcaacagtattttgaagtacagactt
gtagaccaaacacccaaagttccctcagatgaactctttctcattgacgaatatggagga
aaggtccagttgggtaaacggtccttgaagaagcaagacagtcctcagtacaacttaaca
gtagaggtgtctgacatagatttcaagactctctgttctcttcaagtcaacgttattgat
atcaacgatcagattcccatctttgaaagatcagactatggaagcaagactctttctgaa
gacacagccatcggatccaccatcttaatcatccaagctactgatgatgatgagcccttt
accgggagctctaaaattctgtacaagattgtacagggagacactgagggaagactggaa
gttgtcacagatcccatgaccaatacaggatacgtcaagatcagaaagcctcttgatttt
gaaaccgaaccagttactagcattgtgttcaaagcagaaaaccctgagccgctggtgaat
ggcatagagtacaatgctagttcttttgcctccttcgagctgaccgtgacggatgtgaat
gaagtgcctgtatttccccagcaaatattccaagccaacgttagcgaggatactgctata
ggcactaaagtgggcactgtgactgccagggatccggaaggcctgactgtgagttattca
ctgaaagacaataagagaggttggcttaaaatcgactccgtcaccggcgacatatttagc
actgctccgctggacagggaaacagaaagtgtgtatcgagtacaagtggtggccactgaa
gtaggtgggtcctctctgagttctacagcatatttccacctggtcctcatggatgtgaat
gacaacccccctcgcctagctaaggactacacaggcttgttcttctgccatcccctaagt
gcccctgggagcctcatctttgaagccactgatgatgaccagcagtcagttcggaggccc
aagtttacgtttgcccttggcagagaaagcttacaaagtgactgggaagtgtccaaaatc
aatggcacacatgctagactctccaccaagcacacacgctttgaggaacaagtttatgac
atcccaatcctcatcaatgatggggggcagccacccatggaaggcattgtctccttatca
gttactttctgccagtgtgtggacggaagttgtttccggccagcaggcaaccaggttggg
atacccaccgtgggcatggcagttggtatacttctgaccacatttctggtcattggtata
attttagcggttgtattcatccgtatgaggaaagataaagttgaagatccacagtcccct
gagaataagcctctgaggagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (9)   
   RefSeq(nuc) (7)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (37)   

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