KEGG   Rattus norvegicus (rat): 117057
Entry
117057            CDS       T01003                                 
Symbol
Myo1b
Name
(RefSeq) unconventional myosin-Ib
  KO
K10356  myosin I
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    117057 (Myo1b)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rno01009]
    117057 (Myo1b)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    117057 (Myo1b)
   03036 Chromosome and associated proteins [BR:rno03036]
    117057 (Myo1b)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    117057 (Myo1b)
   04147 Exosome [BR:rno04147]
    117057 (Myo1b)
Protein phosphatases and associated proteins [BR:rno01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117057 (Myo1b)
Membrane trafficking [BR:rno04131]
 Endocytosis
  Phagocytosis
   Others
    117057 (Myo1b)
 Others
  Actin-binding proteins
   Myosins
    117057 (Myo1b)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    117057 (Myo1b)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Myosins
     117057 (Myo1b)
Exosome [BR:rno04147]
 Exosomal proteins
  Proteins found in most exosomes
   117057 (Myo1b)
SSDB
Motif
Pfam: Myosin_head Myosin_TH1 IQ AAA_22 AAA_16 nSTAND3
Other DBs
NCBI-GeneID: 117057
NCBI-ProteinID: NP_446438
RGD: 70994
Ensembl: ENSRNOG00000048152
UniProt: Q05096
Structure
Position
9:57182059..57344335
AA seq 1136 aa
MAKKEVKSSLLDNMIGVGDTVLLEPLNEETFIDNLKKRFDHNEIYTYIGSVVISVNPYRS
LPIYSPEKVEDYRNRNFYELSPHIFALSDEAYRSLRDQDKDQCILITGESGAGKTEASKL
VMSYVAAVCGKGAEVNQVKEQLLQSTPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDP
LGGVISNYLLEKSRVVKQPRGERNFHVFYQLLSGASEELLHKLKLERDFSRYNYLSLDSA
KVNGVDDAANFRTVRNAMQIVGFSDPEAESVLEVVAAVLKLGNIEFKPESRMNGLDESKI
KDKNELKEICELTSIDQVVLERAFSFRTVEAKQEKVSTTLNVAQAYYARDALAKNLYSRL
FSWLVNRINESIKAQTKVRKKVMGVLDIYGFEIFEDNSFEQFIINYCNEKLQQIFIELTL
KEEQEEYIREDIEWTHIDYFNNAIICDLIENNTNGILAMLDEECLRPGTVTDETFLEKLN
QVCATHQHFESRMSKCSRFLNDTTLPHSCFRIQHYAGKVLYQVEGFVDKNNDLLYRDLSQ
AMWKAGHALIKSLFPEGNPAKVNLKRPPTAGSQFKASVATLMKNLQTKNPNYIRCIKPND
KKAAHIFSESLVCHQIRYLGLLENVRVRRAGYAFRQAYEPCLERYKMLCKQTWPHWKGPA
RSGVEVLFNELEIPVEEYSFGRSKIFIRNPRTLFQLEDLRKQRLEDLATLIQKIYRGWKC
RTHFLLMKRSQVVIAAWYRRYAQQKRYQQIKSSALVIQSYIRGWKARKILRELKHQKRCK
EAATTIAAYWHGTQARKERRRLKDEARNKHAIAVIWAFWLGSKARRELKRLKEEARRKHA
VAVIWAYWLGLKVRREYRKFFRANAGKKIYEFTLQRIVQKYLLEMKNKMPSLSPIDKNWP
SRPYLFLDSTHKELKRIFHLWRCKKYRDQFTDQQKLIYEEKLEASELFKDKKALYPSSVG
QPFQGAYLEINKNPKYKKLKDAIEEKIIIAEVVNKINRANGKSTSRIFLLTNNNLLLADQ
KSGQIKSEVPLVDVTKVSMSSQNDGFFAVHLKEGSEAASKGDFLFSSDHLIEMATKLYRT
TLSQTKQKLNIEISDEFLVQFRQDKVCVKFIQGNQKNGSVPTCKRKNNRLLEVAVP
NT seq 3411 nt   +upstreamnt  +downstreamnt
atggccaagaaggaggtaaaatcctcacttctggacaatatgatcggcgttggagatacg
gttctcttggagcctctcaacgaggagacattcatcgacaacctgaagaagcgcttcgat
cacaatgagatatatacatacatcgggagtgtggttatatctgttaacccctaccggtcc
ttgcccatttattcaccagagaaagtggaagattacagaaatagaaacttctatgaactg
agccctcacatctttgctttgtcggatgaagcatacagatccctccgtgatcaagataaa
gatcagtgcattctcattactggggagagtggagcgggaaaaacagaggccagcaagctt
gtgatgtcctatgtcgctgcagtgtgtggaaaaggagcagaagttaatcaggtcaaggaa
cagcttctccagtccacccctgtcctggaagcttttggaaatgccaagactgtaaggaat
gacaattcatccagattcggcaaatacatggatattgaatttgactttaaaggcgatccg
ctgggaggagtgataagtaactatcttttagagaaatctcgtgttgttaagcagccgaga
ggtgaaagaaacttccatgtgttctatcagctgctctcgggtgcctctgaggaactcctc
cacaagcttaaactggagcgggatttcagcagatacaactatctgagtctggactctgcc
aaagtgaatggtgtggacgacgctgccaatttcagaactgtcaggaatgccatgcagatc
gtgggcttttcggatcctgaggccgagtctgtcctggaggttgtggcagctgtcttgaaa
ctggggaacatcgagttcaagcctgaatcacgaatgaacggtttggatgaaagcaaaatc
aaagacaaaaatgagttaaaagaaatttgtgagttgaccagcatcgatcaagtggtttta
gaaagagcgttcagtttccgaacggttgaggcgaagcaggagaaagtttcaaccacattg
aatgtggctcaggcttattatgcccgtgatgccctggctaaaaacctctacagccggttg
ttttcatggttggtaaatcgaatcaacgaaagcattaaggcacaaaccaaagtgagaaag
aaggtcatgggtgttctggacatttatggctttgagatatttgaggacaacagcttcgag
cagttcattattaattattgtaatgaaaagcttcaacaaatcttcattgaactgaccctc
aaagaagagcaagaggaatatattcgtgaggacatagaatggactcacattgactacttc
aacaatgctatcatttgcgacctaatagaaaacaacacaaacggaatcttggccatgctg
gatgaagagtgcctgagacccggcactgttacagatgagaccttcctggaaaagctgaac
caagtctgtgccacccaccagcacttcgagagcaggatgagcaaatgttcccgcttcctc
aatgacacgaccctgcctcacagctgcttcagaatccagcattatgctggcaaggtgcta
taccaggtggaagggtttgttgacaagaacaatgaccttctgtaccgagacctgtctcaa
gccatgtggaaggctggccatgccctcatcaagtctctgttccctgaagggaatcctgca
aaggtcaacctgaaaaggcctcctactgcagggtcccagttcaaggcgtcggtggccacc
ctgatgaaaaacctgcagaccaagaacccgaactatatcaggtgcatcaagccgaacgat
aaaaaggccgctcacattttcagtgagagtctcgtgtgtcatcagatccggtacctgggt
cttctggagaacgttcgagtgagacgggcaggctatgccttcaggcaggcctatgaacct
tgtctggaaagatacaagatgctttgcaaacaaacatggcctcactggaagggaccagca
aggtctggtgtggaagttctgtttaatgagctagagattcccgtggaagagtactccttc
ggtagatccaagatattcatccgaaacccaaggacattattccaattagaagacctaagg
aagcagcggctggaggacctggccactctcattcagaagatttatcgaggatggaaatgt
cgtacacattttctgctcatgaaaagaagccaagtcgtgattgccgcctggtacaggaga
tacgcgcaacaaaagcgatatcagcagataaagagttcagccctggtgattcagtcttac
atccggggctggaaggctagaaaaatcctgcgggagctgaagcatcagaaacgctgcaag
gaggcagccaccaccatcgcagcatactggcacggcacccaggcgcgaaaggagcggagg
cggctgaaggacgaggctaggaataagcacgctattgcagttatttgggctttctggctt
ggatcgaaggcacgaagggaattgaaacgcttgaaggaggaggctaggcgtaagcatgca
gttgctgtcatttgggcttactggcttggactgaaggtacgaagggagtacaggaaattc
tttagagcaaatgctggaaagaaaatctatgagtttacacttcaaagaattgtgcaaaaa
tacttgttggaaatgaaaaataaaatgccttccttgtcaccaatagataaaaattggcca
tcaagaccttacctattcttggattcgactcacaaggagctaaaaaggatcttccacttg
tggaggtgtaaaaaatacagggatcaattcacagaccagcagaaacttatttatgaagag
aagctggaggccagtgaactcttcaaagacaagaaggctttatatccttctagtgttggt
cagccattccaaggagcttacctggaaatcaacaagaacccaaaatataagaaactcaaa
gatgccattgaagagaagatcattattgctgaggttgtgaacaaaatcaaccgggctaat
gggaagagtacatctcggattttcctcttaacaaacaataaccttctccttgctgaccaa
aagtcggggcagatcaagtccgaggtccccctggtggatgtgactaaggtctccatgagt
tcacagaatgatggtttctttgcagtacacctcaaggagggttcagaagcagctagtaag
ggtgactttctcttcagcagtgaccacctgattgaaatggcaaccaagttgtatcgcacg
actcttagccaaactaaacagaagctcaatatcgagatttccgatgagttcctggtacag
ttcagacaggacaaagtatgtgtgaagtttattcaaggcaaccagaaaaacgggagcgtg
ccaacctgcaaacgaaagaacaacaggcttcttgaagtcgctgtcccttaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (12)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (10)   
DNA sequence (16)   
   RefSeq(nuc) (10)   
   GenBank (3)   
   EMBL (3)   
3D Structure (5)   
   PDB (5)   
Protein domain (6)   
   Pfam (6)   
All databases (53)   

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