KEGG   Rattus norvegicus (rat): 117259
Entry
117259            CDS       T01003                                 
Symbol
Tra2b
Name
(RefSeq) transformer-2 protein homolog beta
  KO
K12897  transformer-2 protein
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03040  Spliceosome
rno04936  Alcoholic liver disease
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117259 (Tra2b)
 09160 Human Diseases
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    117259 (Tra2b)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rno01009]
    117259 (Tra2b)
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    117259 (Tra2b)
Protein phosphatases and associated proteins [BR:rno01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117259 (Tra2b)
Spliceosome [BR:rno03041]
 Common components
  Common spliceosomal components
   SR proteins
    117259 (Tra2b)
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_3 FMP27-BLTP2_C
Other DBs
NCBI-GeneID: 117259
NCBI-ProteinID: NP_476460
RGD: 619886
Ensembl: ENSRNOG00000001783
UniProt: P62997 A6JS59
Position
11:92293403..92311651
AA seq 288 aa
MSDSGEQNYGERESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRS
RRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCL
GVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERAN
GMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSY
RGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRRY
NT seq 867 nt   +upstreamnt  +downstreamnt
atgagcgacagcggcgagcagaactacggcgagcgggaatcccgttctgcttcccgaagt
ggaagtgctcatggatcggggaaatctgcacggcacacacctgcaaggtctcgctccaag
gaagattcaagacgttctagatcaaagtcaagatccagatctgaatctaggtctagatcc
agaagaagttctagaaggcattatacaaggtcacgatcacgatctcgctctcatagacga
tcccggagcaggtcttacagccgagactatcgcagacgccacagccacagccattctccc
atgtctactcgaaggcgtcatgttgggaaccgggcaaatcctgaccccaactgttgtctt
ggagtgtttggattgagcttgtacaccacagaaagagatctaagagaagtgttctctaag
tatggccccattgctgatgtgtctattgtgtatgaccagcagtctagacggtcaagagga
tttgcctttgtatattttgaaaatgtagatgatgccaaggaagctaaagaacgtgccaat
ggaatggagcttgatggacgtcggattagggtcgatttctctataacaaaaaggccccat
accccaacaccaggaatttatatggggagacccacttatggcagttcacgacgccgggac
tattatgaccgaggatatgatcggggttatgatgaccgggactattacagcagatcatac
agaggaggaggtggaggaggaggtggatggagagcagctcaagatagagatcagatttac
agaaggcggtcaccttctccttactacagtcgtggaggatacaggtctcgttctcgatca
agatcctactcacctcgtcgctattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (13)   
   RefSeq(nuc) (3)   
   GenBank (5)   
   EMBL (5)   
Protein domain (4)   
   Pfam (4)   
All databases (35)   

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