KEGG   Rattus norvegicus (rat): 117265
Entry
117265            CDS       T01003                                 
Symbol
Pex6
Name
(RefSeq) peroxisomal ATPase PEX6
  KO
K13339  peroxin-6
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    117265 (Pex6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    117265 (Pex6)
Membrane trafficking [BR:rno04131]
 Autophagy
  Pexophagy
   Other pexophagy associated proteins
    117265 (Pex6)
SSDB
Motif
Pfam: AAA AAA_16 AAA_lid_3 AAA_5 AAA_22 AAA_33 AAA_11 nSTAND3 RuvB_N NACHT TsaE TIP49 AAA_25 AAA_19 RNA_helicase AAA_30 AAA_17 AAA_18 AAA_28 AAA_7 Mg_chelatase Vps4_C AAA_14 IstB_IS21 bpMoxR SLFN-g3_helicase DUF815 DEAD PhoH Parvo_NS1
Other DBs
NCBI-GeneID: 117265
NCBI-ProteinID: NP_476466
RGD: 621637
Ensembl: ENSRNOG00000016655
UniProt: P54777 A6JIM9
Position
9:complement(21755747..21767939)
AA seq 978 aa
MALAVLHVLEPFPTETPPLAVLLPPGGPWPVTGVGLVLALRPASESPAGPALLVAAVEGS
GAQCEQRGPGPPPLLVSRTLLRVLALSPGARVRARPVRRPPALGWALLGTSPGPGLGPRV
GPLLVRRGETLPVPGSRVLETRPALQGLLGPGTRLAVTELQGRTKLDPESRDHNHPPPPP
VVSSFAVSHSIRQLRGVLGGTGDALGVSRSCLRSLGLFQGEWVWVARVGELPNTSQPHLA
QVQVLEPRWDLSARLGPNSGQPGEPLADGLVFVPATLAFNLGCDPLEVGELRIQRYLEDS
TAAEDKGSCSLLPGPPFARELHIEVLPSPHCGVNGKYDHVLYQHFHTPRVVQEGDVLCVS
TAGQVEILEGSLERLPRWREVFFKVKKTVGEAPDGPASAFLADTTHTSLYLAGTTLSRVP
PLPSGRSPPWDSLSPPGLEALVNELCAVLKPHLQPGGTLLTGTSCVLLQGPPGSGKTTAV
TAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVVLLLTALDLLGRDRDG
LGEDARVVATLRHLLLDEDPLSRCPPLMVVATTSRVQDLPTDVRTAFPHELEVPVLSESQ
RLSVLQALTAHLPLGQEVNLSQLARRCAGFVVGDLYALLTHASRAACTRIKAAGLAMSEE
DEGELCAAGFPLLAEDFGQALDQLQTAHSQAVGAPKIPSVSWHDVGGLQDVKKEILETIQ
LPLEHPELLSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSE
ENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDV
FVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLMNVL
DCCPPQLTGADLYSLCSDAMMTALKRRVRDLEEGLEPRSSALLLTMEDLLQAAARLQPSV
SEQELLRYKRIQRKFAAC
NT seq 2937 nt   +upstreamnt  +downstreamnt
atggcgcttgctgtattgcatgtcctagaacccttcccgactgagacaccaccgttggcg
gtgctgttgccgcccgggggcccgtggccagtgaccggggtaggcctggtgctggcgcta
cggccggcgagcgaaagtcctgcgggacccgcgctgctcgtggcggccgtggaagggtcc
ggcgcccaatgcgagcagcgagggcccgggcctccgccgctgctggtgagccgcacgctg
ctgcgggtcctagcgctgagccccggagcgagagtgcgagcgcggcctgtgcggcggcct
ccagccttgggctgggcgctgcttggcacgtctccgggtcctgggcttgggcctcgagtc
gggccgctgctggtgcgtcgcggggagacactaccggtgcccggttctcgagtgttggag
acgcgaccggccttgcaagggttgctgggcccggggacacggctagctgtaactgagctc
caggggcggaccaaactggacccggagagtagggaccacaaccatcccccacccccgccc
gtagtttcctcctttgcagtttcccactcaatccggcagctccgaggagttctgggaggg
actggagatgcactaggtgtgagccggagctgtctccggagtctcgggctcttccagggc
gaatgggtatgggtggcccgagtcggagagttaccaaacacctcccagccgcacttggct
caagtacaggttctagagcctcgctgggacctgtccgcgagactgggacccaactctggg
cagccgggagagccactcgcggacggactggtgtttgtgcctgccactctagcttttaat
ctcggctgtgaccccctggaagtgggagagctcagaattcagaggtatctggaagactct
actgctgctgaggacaaaggaagctgctcactactgcctgggcctccgtttgctcgagag
ttacacatcgaagttctgccctcgcctcactgtggtgtcaatgggaaatatgaccatgtt
ctctaccagcacttccacacgcccagggtggtccaggaaggggatgttctgtgtgtgtca
acggctgggcaagttgagatcctggaaggaagcctggagagactgcccaggtggcgggag
gtgtttttcaaagtgaagaaaacggttggagaagccccagatgggccagccagtgccttc
ctggccgataccacacacacctctttatacctggctggtaccaccctgagtcgtgtcccc
ccgctgccttcaggaaggtccccaccctgggacagcttgtctcctccaggcctggaggcc
ttggtaaatgagctgtgtgctgtcctgaagcctcatctgcagcccggaggaacactgctc
acaggaaccagctgtgtgctcctgcagggtcccccaggcagcgggaagaccaccgcggtc
acagctgcatgcagtcgcctcgggctccatctgctgaaggtgccttgctccagcctctgt
gcagatagcagtaggactgtggagacaaagctgcagaccaccttctcccgggcccgccgc
tgcaggcctgtggtcctcctgctgacagccctggaccttctgggccgggaccgagatggg
ctgggtgaggatgcccgcgttgtggccacactgcgtcacctcctcctcgatgaggaccct
ctgagcaggtgccctcctctcatggtggtggccactacaagccgtgtccaggacctgccc
accgatgtgcggacggcatttcctcatgagctggaggtgccagtgttgtctgagagtcag
cggctcagtgtcctgcaggccctcactgcccatcttcccttgggccaggaggttaacctg
tcacagctggcacggcgctgtgcgggctttgtggtaggggacctctatgcccttctgacc
catgccagccgggcagcctgcaccaggatcaaagctgcaggcttggcgatgagtgaggag
gatgagggggagctgtgtgccgctggctttcccctgttggccgaggacttcgggcaggcg
ttagatcaactacaaacggctcactcccaagcagtaggagcgcccaagatcccttcagtg
tcctggcacgatgtgggtgggctgcaggatgtgaagaaggagatcctggagaccatccaa
ctgcctctggaacaccctgagctgctaagcctgggcctaagacgatcaggccttctgctc
catgggcccccaggcactggcaagaccctgctggccaaggcggtagccactgagtgcagc
ctcacctttctcagtgtaaaggggccagaactcatcaacatgtatgtgggccaaagtgag
gagaatgttcgggaagtgtttgccagggccagggctgctgccccgtgcatcatcttcttt
gatgaactggactccttagctccgagccgtggacggagtggagactctggaggtgtgatg
gacagagttgtgtctcagctcttagctgagctggacgggcttcacagcactcaggatgtg
tttgtgatcggagccaccaacagaccagacctcctggatcctgcccttctgcggcctggc
agatttgacaagctggtgtttgtaggagcaagtgaggaccgggcctcccagctgcgcgtt
ctgagcgccatcacacgaaagttcaagctggaggcctctgtgagcctgatgaatgtgctg
gattgctgcccgcctcagctgaccggcgcagacctctattctctctgctctgacgccatg
atgaccgccctcaaacgcagggtccgagacctagaggaagggctggagcctcggagctca
gcactgttgctcaccatggaggacctgttgcaggccgcagcccggctgcagccctcagtc
agcgagcaggagctgctgcgatacaagcgtatccaacgcaagtttgctgcctgctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (30)   
   Pfam (30)   
All databases (52)   

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