KEGG   Rattus norvegicus (rat): 117541
Entry
117541            CDS       T01003                                 
Symbol
Smu1
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    117541 (Smu1)
Spliceosome [BR:rno03041]
 Complex B
  Other components
   Complex B specific factors
    117541 (Smu1)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 LisH_TPL Ge1_WD40 Nup160 TFIIIC_delta PROPPIN zf_topless
Other DBs
NCBI-GeneID: 117541
NCBI-ProteinID: NP_476543
RGD: 620694
Ensembl: ENSRNOG00000007671
UniProt: Q99M63
Position
5:complement(60652680..60671251)
AA seq 513 aa
MSIEIESSDVIRLIMQYLKENSLHRALATFTEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQD
GHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtcgatcgaaatcgagtcttccgatgtgattcgtctaatcatgcagtacttgaaggag
aacagtttacatcgggcattggccaccttcacggaggaaaccactgtctctctgaatact
gtggatagcattgaaagttttgtggctgatattaatagtggccactgggacactgtttta
caggctatccagtctctgaaattgccagacaaaacccttattgatctctatgaacaggtt
gttttggaattgatagagcttcgtgaactgggtgctgccaggtcacttctgagacagact
gaccccatgattatgttaaagcaaacacaaccagagcgatatattcatctggaaaacctg
ctagccagatcttactttgaccctcgggaggcgtatccagatggaagcagcaaagagaaa
aggagagcggcgattgcccaggctttggctggggaggtcagcgtggtgccgccttcccgt
ctcatggcgttgctgggacaggcactgaagtggcagcagcaccagggattgcttcctcct
ggtatgaccatagatttgtttcgaggcaaggcagctgtcaaagatgtggaagaagagaag
tttcccacacagctgagcagacatattaagtttgggcagaaatcccacgtggagtgcgct
cggttctctccagacggtcagtatctggtcaccggctctgttgacggatttattgaggtg
tggaacttcactactgggaaaatcaggaaggatcttaagtaccaggcccaggataacttc
atgatgatggatgatgctgtcctctgcatgtgtttcagcagagacactgaaatgttagca
actggggcccaagacggaaagatcaaggtttggaagattcagagtggacagtgtttgaga
agatttgaaagggcacatagtaaaggtgtcacctgtctaagcttttccaaggacagcagt
cagatcctcagtgcttcttttgaccagacaataagaattcatggtttaaaatctggaaaa
acacttaaggaatttcgaggccattcctcctttgtcaatgaggcaacatttacacaagat
gggcattacattatcagtgcatcctctgatggcactgtgaagatctggaatatgaagacc
accgaatgttcaaatacctttaaatccctgggcagtactgcagggacagatattacagtc
aatagtgtaattctgcttcctaaaaacccagagcattttgttgtgtgcaaccgatcgaac
acagtggtcatcatgaacatgcaggggcagattgtcagaagcttcagctctggtaaaaga
gagggtggtgactttgtctgctgtgccctctcccctcgtggcgagtggatctactgtgtt
ggggaggactttgtgctctactgcttcagcacagtcactggcaagctggagagaactctg
acggttcatgaaaaggatgtgatcggaattgcacaccacccgcaccagaacttgattgcc
acctacagtgaagatggactcctgaagctctggaaaccctaa

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