KEGG   Rattus norvegicus (rat): 117557
Entry
117557            CDS       T01003                                 
Symbol
Tpm3
Name
(RefSeq) tropomyosin alpha-3 chain isoform Tpm3.3cy
  KO
K09290  tropomyosin 3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04260  Cardiac muscle contraction
rno04261  Adrenergic signaling in cardiomyocytes
rno04814  Motor proteins
rno04820  Cytoskeleton in muscle cells
rno05200  Pathways in cancer
rno05216  Thyroid cancer
rno05410  Hypertrophic cardiomyopathy
rno05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    117557 (Tpm3)
   04820 Cytoskeleton in muscle cells
    117557 (Tpm3)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    117557 (Tpm3)
   04261 Adrenergic signaling in cardiomyocytes
    117557 (Tpm3)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    117557 (Tpm3)
  09162 Cancer: specific types
   05216 Thyroid cancer
    117557 (Tpm3)
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    117557 (Tpm3)
   05414 Dilated cardiomyopathy
    117557 (Tpm3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    117557 (Tpm3)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     117557 (Tpm3)
SSDB
Motif
Pfam: Tropomyosin Laminin_II DUF745 TMF_DNA_bd DUF3450 HR1 Crescentin XhlA CENP-F_leu_zip CALCOCO1 Lebercilin DUF1664 DUF16 HrpB7 Exonuc_VII_L WS_DGAT_cat EzrA SlyX Nuf2_DHR10-like ATG16 ERM_helical
Other DBs
NCBI-GeneID: 117557
NCBI-ProteinID: NP_001288215
RGD: 621546
Ensembl: ENSRNOG00000017441
UniProt: Q63610 A6J6K0
Position
2:177812534..177842661
AA seq 248 aa
MAGSTTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVE
EELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAE
EADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQ
KEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISDELDH
ALNDMTSI
NT seq 747 nt   +upstreamnt  +downstreamnt
atggccgggagcaccaccatcgaggcggtaaagcgcaagatccaggttctgcagcagcag
gctgatgatgcggaggagagggctgagcgcctccagcgggaagtggagggagaaaggcgg
gcccgggagcaggctgaagctgaggtggcttccttgaaccgtaggatccagctggttgaa
gaggagctggaccgcgcccaggagcgccttgccactgctttgcagaagctggaggaagcg
gagaaggctgctgatgagagtgagagaggtatgaaggtgattgaaaaccgggctctaaaa
gatgaagaaaagatggagctccaggaaatccagctgaaggaagcaaagcacattgcagaa
gaggcagacaggaagtatgaagaggtggctcgtaagttggtgatcattgaaggagacttg
gaacgcacggaggaacgcgccgagctggcagagtctaagtgttctgagctggaggaggag
ctgaagaatgtcaccaacaacctcaaatctcttgaggctcaggcggagaagtactctcaa
aaagaagacaagtatgaagaagaaataaagattcttactgataaactcaaggaggcggag
acccgggctgagtttgctgaaagatcggtagccaagctggaaaagaccattgatgacttg
gaagatgagctctatgcccagaaactgaagtacaaggccattagcgacgagctggaccac
gccctcaatgacatgacctctatataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (27)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (24)   
DNA sequence (62)   
   RefSeq(nuc) (24)   
   GenBank (19)   
   EMBL (19)   
Protein domain (21)   
   Pfam (21)   
All databases (127)   

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