KEGG   Rattus norvegicus (rat): 124451
Entry
124451            CDS       T01003                                 
Symbol
Lhx5
Name
(RefSeq) LIM/homeobox protein Lhx5
  KO
K18493  LIM homeobox protein 5
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    124451 (Lhx5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    124451 (Lhx5)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain LIM
    124451 (Lhx5)
SSDB
Motif
Pfam: LIM Homeodomain Homeobox_KN
Other DBs
NCBI-GeneID: 124451
NCBI-ProteinID: NP_620605
RGD: 71079
Ensembl: ENSRNOG00000001392
UniProt: P61376 A6J1J7
Position
12:complement(36126186..36134625)
AA seq 402 aa
MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
SSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQSDYYAPGGNYDFFAHGP
PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHGADNPRFTDMISHPDTPSPEPGLPGA
LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
NT seq 1209 nt   +upstreamnt  +downstreamnt
atgatggtgcactgtgccggctgtgagcggcccatcctcgaccgctttctgctgaacgtg
ctggaccgcgcgtggcatatcaaatgtgttcaatgctgcgagtgcaaaaccaacctctcg
gagaagtgtttctcccgggagggcaagctgtactgtaaaaacgacttcttcaggcgcttt
ggcacaaagtgcgccggctgtgcgcaaggtatctctcccagcgacctggtgcgcaaggcc
cggagcaaagtcttccacctcaactgcttcacctgcatggtgtgcaacaagcagctgtcc
accggagaagaactctacgtgatcgacgagaacaagtttgtgtgcaaggacgactactta
agctcctctagtctcaaagagggaagcctcaactcagtgtcatcctgtacggaccgcagt
ttgtctccggacctccaagatccgttacaggacgaccccaaagagaccgacaactcgacc
tcatcggacaaggagaccgctaacaacgagaatgaggaacagaactccggcaccaaacgg
cgcggcccgcgcactaccatcaaggccaagcagctggagacgctcaaggcagccttcgca
gccacgcccaagcccacgcgccacatccgcgaacagctggcacaagagaccggcctcaac
atgagggtcattcaggtgtggtttcagaaccgaaggtccaaagaacgccgcatgaaacag
ctgagcgctctgggcgcccggagacacgccttcttccggagtccgcggcgcatgcgtccc
ctgggcggccgcttggacgagtctgagatgttggggtctaccccatatacttattatgga
gactaccaaagcgactactacgctccgggaggcaactacgatttcttcgcgcacggcccg
ccgtcgcaggcacagtctccggccgactcaagcttcttggcagcatcgggacctggctcg
acgccgcttggcgcgctggaaccaccgctggctgggcctcacggcgcggacaaccctagg
ttcaccgacatgatctcgcacccggacacgcccagtccggagccaggcttgcccggagcg
ctgcaccccatgccgggagaggtgttcagcggcgggcccagcccgcccttccccatgagc
ggcaccagcggctacagcggacccctgtcgcaccccaatcctgagctcaacgaagcggcc
gtatggtaa

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