KEGG   Rattus norvegicus (rat): 140587
Entry
140587            CDS       T01003                                 
Symbol
Sox5
Name
(RefSeq) transcription factor SOX-5 isoform 2
  KO
K09269  transcription factor SOX5/6/13 (SOX group D)
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    140587 (Sox5)
Transcription factors [BR:rno03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    140587 (Sox5)
SSDB
Motif
Pfam: HMG_box HMG_box_2 MPS2
Other DBs
NCBI-GeneID: 140587
NCBI-ProteinID: NP_001258196
RGD: 620471
Ensembl: ENSRNOG00000027869
Vega: OTTRNOG00000001409
UniProt: F1M8W4
Position
4:complement(178512272..179467686)
AA seq 763 aa
MLTDPDLPQEFERMSSKRPASPYGETDGEVAMVTSRQKVEEEESERLPAFHLPLHVSFPN
KPHSEEFQPVSLLTQEACGPRTPAAQHSTMEVDGNKVMSSLAPYNSSTSPQKAEEGGRQS
GESVSSAALGTPERRKGSLADVVDTLKQRKMEELIKNEPEDTPSIEKLLSKDWKDKLLAM
GSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMEL
AKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLL
PPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQFYAAQLAAMQVSPGGKLLGL
PQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSDGKSPASPTSPHMPAL
RINSGAGPLKASVPAALASPSARVSTIGYLNDHDAVTKAIQEARQMKEQLRREQQALDGK
VAVVNSIGISNCRTEKEKTTLESLTQQLAVKQNEEGKFSHGMMDFNMSGDSDGSAGVSES
RIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNL
EKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYF
NVGQQAQIPIATAGVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEP
HIKEEIQAEDINGEIYEEYEEEEEDPDVDYGSDSENHIAGQAN
NT seq 2292 nt   +upstreamnt  +downstreamnt
atgcttactgaccctgatttacctcaggagtttgaaaggatgtcttccaagcgaccagcc
tctccgtatggggagacagatggagaggtagccatggtgacaagcagacagaaagtggaa
gaggaggagagtgagaggctcccagcctttcaccttcccttacatgtgagttttcccaac
aagcctcactctgaggaatttcagccagtttctctgctgacgcaagaggcttgtggtcct
aggacccccgctgctcagcacagtacaatggaagtcgatggcaataaagttatgtcttca
ttagctccgtacaactcatctacctcacctcagaaggcggaagaaggtgggcgacagagt
ggggagtcggtgtcgagcgcagccctggggactcccgagcggcgcaagggcagcttagcg
gatgtggtcgacaccttgaagcagaggaagatggaggagctgatcaagaacgagccggaa
gacactcccagcattgaaaagctcctctccaaggactggaaagacaagctcctggcaatg
ggatcagggaactttggagaaatcaaagggactcctgagagcctcgctgagaaggagcgg
cagctcatgggtatgatcaatcagctgaccagtctacgggagcaactcctggctgcccat
gatgagcagaagaagttggctgcgtctcagatagagaaacagcgccagcagatggagttg
gccaagcagcagcaggagcagatcgcaaggcaacagcagcagcttctgcagcaacaacac
aaaatcaacttgctccagcaacagatccaggttcaaggtcagctgccgccattgatgatt
cccgtgttccctcccgaccagcggaccctcgcagcagctgcccaacaaggattcctcctt
cctcctggtttcagctacaaggctgggtgcagtgacccttaccccgttcagctgatccca
accaccatggcagctgccgctgcagcgacaccaggcttaggcccactccagctgcagcag
ttctatgctgcccagctagctgcaatgcaggtttctccaggagggaagctcctaggccta
ccccaaggcaaccttggtgctgccgtgtctcctaccagcattcacacagacaagagcaca
aacagcccaccacccaaaagcaaggatgaagtggcccagccactgaacctatcagctaag
cccaagacctctgacggcaaatcacctgcgtcacccacctctcctcacatgccagctctg
agaattaacagtggagcgggtcccctcaaagcctctgtcccagcagcgttagctagtcct
tcagcgagagttagcacaataggttatttaaatgaccacgatgctgtcaccaaggcaatc
caagaagcccgccagatgaaggaacagctgaggcgggagcagcaagcgctggatgggaag
gtggccgtagtgaacagcataggtatcagcaactgccggacagaaaaggaaaaaacaaca
ctggagagcctgactcagcagttggcagttaaacagaatgaagaagggaaatttagccat
ggaatgatggatttcaacatgagtggggattctgacggaagcgctggagtctcagagtcg
agaatttacagggaatccaggggacgcggtagcaatgagccgcacataaagcgtccaatg
aatgccttcatggtgtgggcgaaagatgaacggaggaaaatccttcaggcctttcccgac
atgcacaattccaacatcagcaagatactgggatctcgttggaaagctatgaccaaccta
gagaaacagccatactatgaggagcaggcccggctcagcaaacagcacctggagaagtac
ccagactacaagtacaaacccaggccgaagcgcacttgtctggtagatgggaagaaactg
cgcattggagagtacaaggccatcatgcggaatcggaggcaggaaatgcgacagtacttc
aacgttgggcaacaagcacagatccccatcgctacggccggtgtcgtgtaccccggtgcc
atcgccatggcaggaatgccgtcccctcacctgccctcagagcactcgagcgtgtccagc
agcccagagcccgggatgcccgtgattcagagcacttacggcgtgaagggagaggagcct
cacatcaaggaagaaatccaggctgaggacatcaacggagagatttatgaggagtacgag
gaggaggaggaggaccccgacgtcgactatgggagtgacagcgaaaaccatattgcagga
caagccaactga

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