KEGG   Rattus norvegicus (rat): 140588
Entry
140588            CDS       T01003                                 
Symbol
Gli3
Name
(RefSeq) transcriptional activator GLI3
  KO
K06230  zinc finger protein GLI3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04024  cAMP signaling pathway
rno04340  Hedgehog signaling pathway
rno05200  Pathways in cancer
rno05217  Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    140588 (Gli3)
   04024 cAMP signaling pathway
    140588 (Gli3)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    140588 (Gli3)
  09162 Cancer: specific types
   05217 Basal cell carcinoma
    140588 (Gli3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    140588 (Gli3)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 GLI-like
    140588 (Gli3)
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 FOXP-CC zf-C2H2_4 Zap1_zf1
Other DBs
NCBI-GeneID: 140588
NCBI-ProteinID: NP_536330
RGD: 620272
Ensembl: ENSRNOG00000014395
UniProt: F1M9H1 A6K9B6
Position
17:complement(54134064..54405198)
AA seq 1582 aa
MEAQSHSSTTTERKKAESSIAKCPTRTDVSEKAVASSTTSNEDESAGQIYHRERRNAITM
QPQSVQGLSKISEEPSTSSDERASLIKKEIHGSLPHLAEPSLPYRGTVFAMDPRNGYMEP
HYHPPHLFPAFHPPVPIDARHHEGRYHYDPSPIPPLHVPSALSSSPTYPDLPFIRISPHR
NPTAASESPFSPPHPYINPYMDYIRSLHSSPSLSMISAARGLSPTDAPHAGVSPAEYYHQ
MALLTGQRSPYADILPSAATAGAGAIHMEYLHAMDSTRFPSPRLSARPSRKRTLSISPLS
DHSFDLQTMIRTSPNSLVTILNNSRSSSSASGSYGHLSASAISPALSFTYPSAPVSLHMH
QQILSRQQSLGSAFGHSPPLIHPAPTFPTQRPIPGIPTVLNPVQVSSGPSESSQSKPTSE
SAVSSTGDPMHNKRSKIKPDEDLPSPGSRGQQEQPEGTTLVKEEGDKDESKQEPEVIYET
NCHWEGCTREFDTQDQLVHHINNDHIHGEKKEFVCRWLDCSREQKPFKAQYMLVVHMRRH
TGEKPHKCTFEGCTKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRT
HSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRGDMHPRPPPPRDSGSHS
QSRSPGRPTQGAFGEQKELSNTTSKREECLQVKTVKAEKPMTSQPSPGGQSSCSSQQSPI
SNYSNSGLELPLTDGGSIADLSAIDETPIMDSTISTATTALALQGRRNPAGTKWMEHIKL
ERLKQVNGMFPRLNPILPSKAPAVSPLIGNGTQSNNNYSSGGPGTLLPSRSDLSGVDFTV
LNTLNRRDSNTSTISSAYLSSRRSSGISPCFSSRRSSEASQAEGRPQNVSVADSYDPIST
DASRRSSEASQGDGLPSLLSLTPVQQYRLKAKYAAATGGPPPTPLPHMEKLSLKTRMALL
GEGRDSGVTLPPVHPPRRCSDGGGHTYSRRHLLPHDALANSARRASDPVRTVSENMSLPR
VQRFSSLNSFNPPNLPPSVEKRSLVLQNYTRQESTHPRYFQASPCPPSITENVALEALTM
DADASLNDEDFLPDDVVQYLNSQNQTGYGQQLQSSISEDGKVAREPEDLDLPGLPDSHVG
QQYPALEQPCSEGSKTDLPIQWNEVSSGSSDLSSSKLKCGQRPTVQQARGFGLYSNMVVH
PQNLWKVGTGPAGGSQTLGENGSSYSDPEHFAVHSGDGLGPSGDTFHEQAYKTQQYGSQL
SRQPLTSSVLDSACGAGIQGSKLKGNSLQENGGLLDFGLSMAPNELADNIVNGIQTQEQM
GQGYIAPQLLSGSMQHQGPSRPGQQVLGQVGATSHINIYQGTESCLPGTQDKISQPSSMA
VIRGYQPCASYGGSRRQAMPRGSLTLQQGQLSDVSQTSRVNSIKMEAHGQSHQLCSSMQN
YSGQFYDQTMGFSQQDRKAGSFSLSEANCLLQENGSENSELLSPGVNQVTSTVDSFESHD
LEGVQIDFDAIIDDGDHTSLMSGALSPSIIQNLSHSSSRLTTPRASLPFPSLSMSTTNMA
IGDMSSLLTSLAEESKFLAVMQ
NT seq 4749 nt   +upstreamnt  +downstreamnt
atggaggcccagtcccacagctcgacgacaactgagaggaagaaagctgaaagttccatt
gcgaagtgtcccacaagaacagatgtcagtgagaaggccgtggcctccagtaccacttca
aatgaggatgaaagtgctggacagatctatcaccgagagagaagaaacgcaatcactatg
cagcctcagagtgtgcagggtctcagcaaaatcagtgaggagccctcaacatctagtgat
gagagggcctcgttgatcaagaaagagatccatggatctctaccacatctggctgagccc
tctctcccttatcgtgggactgtgtttgccatggatccccggaatggttacatggagcct
cactaccaccctcctcatctttttcctgccttccatcctcctgtaccgattgatgccaga
catcacgagggccgctaccattatgatccatctcctattcctccattacacgtgccttct
gccttatctagtagtccaacgtatccagacttgcctttcattaggatctccccacaccgt
aaccccactgcagcttcagagtcccccttcagccccccacacccctacatcaacccatat
atggactacatccgctccttgcacagcagcccatccctctccatgatctccgctgcccga
gggctgagccccacagatgccccccatgctggagtcagccctgcggaatactatcaccag
atggctctgctgacaggccagcgcagcccctatgcagacatccttccctcagccgccact
gctggtgcaggggccatccatatggagtaccttcatgccatggacagcaccagatttccc
agccctagactgtcagctaggcccagccgaaagcgtaccctgtcgatctctccactgtca
gatcatagcttcgaccttcagaccatgataagaacatctcctaactccttggtcacaatc
ctcaataattcccgtagcagttcttcagcaagtggttcctatgggcacttatctgcaagt
gcaatcagccctgctttgagcttcacctacccctccgcccccgtgtctctccatatgcat
caacagatcctaagccgacagcagagcttaggttcagcatttggacatagccctcccctc
atccaccctgctccaacatttccaacgcagagacccatccctgggattccgacggttctg
aaccctgtccaggtcagctctggcccttctgagtcttcacagagcaaacccacaagtgag
tctgcagtgagtagtaccggtgaccctatgcataataagcggtccaagatcaagcccgat
gaagacctccccagcccaggatcacgggggcagcaggaacagccggagggaacaacccta
gtcaaggaggaaggggacaaagatgaaagcaagcaggagcctgaagtcatctatgagaca
aactgccactgggaaggctgcacaagagagttcgacacccaggatcagcttgtgcatcat
atcaataatgaccacattcatggagaaaagaaggagtttgtgtgccgctggcttgattgt
tcaagagagcagaaaccgttcaaagcccagtacatgttggtagtacatatgagaagacac
accggagagaagcctcacaaatgtacatttgaaggttgtacaaaagcctactcaagactc
gaaaacctgaaaacccacttgagatctcacactggagagaagccatatgtctgtgagcat
gagggctgcaacaaggctttctctaacgcttcagatcgggccaagcaccaaaacagaaca
cattccaatgagaaaccatatgtatgcaaaatccctggctgcaccaagcgttacacagac
cccagctctctccggaaacatgtgaagactgtgcatggccctgaggctcatgttaccaag
aagcagcgtggggacatgcaccctcggcctccaccacctagagattctggcagccattca
cagtccaggtcccccggccggccgactcagggagcattcggtgagcagaaggagctgagc
aacactacctcaaagcgggaagaatgcctccaggtgaagactgtcaaggctgaaaagccc
atgacatctcagccaagccctggtggtcagtcttcatgcagcagccaacagtcccccatc
agcaactattccaacagtgggctcgagcttcctctgactgatggaggtagtatagcagac
ctcagtgccatcgatgagaccccaatcatggactcgaccatttccacggcaaccacagcc
cttgctttgcaaggcaggagaaacccagcagggaccaaatggatggagcatatcaaactt
gaaaggctaaagcaagtgaatggaatgtttccaagactgaaccctattctaccctccaaa
gcccctgcggtatctcctctcataggaaatggcacacagtcaaataacaactacagttca
ggcgggcccgggacccttctcccgagcagaagtgatctgtcgggtgtagacttcactgtg
ctgaacacgctcaacaggagggacagcaacaccagcaccatcagctctgcctacctgagc
agccgcagatcctcgggcatctccccctgcttttccagccgcaggtccagtgaggcatcg
caggctgaagggcgaccccagaatgtgagtgtggccgactcctacgatcccatctccaca
gatgcttcacggaggtccagcgaggccagccagggtgatgggctgcccagtctgctcagc
ctcacacccgtgcagcagtaccgcctgaaggccaagtatgctgctgccacgggtggcccg
ccacccacacctctgccccacatggaaaagctgagcctgaagaccaggatggccctgctc
ggggaggggagggactcaggggtgactctgcctccagtccatcctcctcggagatgcagt
gatggaggaggccatacatacagcaggcgtcacctactgcctcatgatgcgctagcaaac
agtgcgaggagagccagcgaccctgtgaggaccgtctccgagaacatgtcacttcccagg
gttcaacgcttcagcagcctgaatagctttaatcctccaaatttgcctccatccgtggaa
aagcgtagtttagtgctgcaaaattatacccggcaggagagcacccatccccggtacttc
caagcatccccttgccctcccagcatcacagagaatgttgccctggaggccctgaccatg
gatgctgatgctagcttgaatgatgaagatttcctgccagatgatgtggtacagtatttg
aattcccagaaccaaacagggtatgggcagcaattacagagttccatctctgaagatggc
aaagtagcccgtgagccagaggacttggacttaccggggctgccagacagtcatgttggc
cagcaatacccagctctggagcaaccctgctccgagggcagtaaaactgatttgcccatc
cagtggaatgaggtcagctctggaagttctgatctgtcatcctccaagctgaagtgtggt
cagcgccctaccgtacagcaggctcgaggctttgggttatacagcaatatggtggtacat
ccacagaacctgtggaaggttggcactggcccagctgggggatctcagacccttggggag
aatggcagttcctacagtgacccagagcactttgcagtccacagtggggatggacttggc
cccagtggagatactttccatgaacaggcctataagacccagcagtatgggagccagctc
agcaggcagccactgacttccagtgttctagacagtgcctgtggtgctgggattcaaggg
tccaagctgaaaggcaacagtttgcaagagaatgggggtttgctagattttggcctgtcc
atggcaccaaatgagttagctgacaacatagtgaatggcatacaaacccaagaacaaatg
gggcaggggtacattgctcctcagctactcagtggcagcatgcaacaccaggggcccagt
cgccctggtcaacaggtactagggcaggttggtgctacctcacatatcaacatctatcaa
gggacagagagctgcctaccagggactcaggacaagatcagccagccatcaagtatggca
gttatcaggggctaccagccctgtgccagctatgggggcagcaggcgtcaggcaatgcca
aggggcagcctcactctgcaacaaggacagctcagtgacgtgagtcagaccagcagggtg
aacagcatcaaaatggaggcacacgggcagtcccatcagctctgctctagcatgcagaat
tattccggtcagttttatgaccaaaccatgggcttcagtcagcaagacaggaaagctggc
tcattctccctctcagaggccaactgcctgctccaggagaatggctctgaaaattctgag
ttactttccccaggtgttaaccaggtgaccagcacagttgacagctttgagagtcatgac
ctagaaggcgtgcagattgattttgatgccatcatagatgatggggaccataccagccta
atgtcaggggccttgagccccagtatcattcagaacctttcccacagctcctcccgtctc
accacacctcgggcatccctcccattcccttctctgtccatgagcaccaccaacatggct
attggggatatgagttctttgctgacctcccttgcagaagaaagcaagttccttgcagtt
atgcagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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