KEGG   Rattus norvegicus (rat): 140592
Entry
140592            CDS       T01003                                 
Symbol
Ppfia4
Name
(RefSeq) liprin-alpha-4
  KO
K26226  liprin-alpha
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    140592 (Ppfia4)
Membrane trafficking [BR:rno04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    140592 (Ppfia4)
SSDB
Motif
Pfam: SAM_1 SAM_2 DUF922
Other DBs
NCBI-GeneID: 140592
NCBI-ProteinID: NP_536334
RGD: 620055
Ensembl: ENSRNOG00000003494
UniProt: Q91Z80
Position
13:complement(48305844..48354329)
AA seq 1185 aa
MCEVMPTINEGDPLGPPHGADADANFEQLMVNMLDEREKLLESLRESQETLVATQSRLQD
ALHERDQLQRHLNSALPQEFATLTRELSMCREQLLEREEEISELKAERNNTRLLLEHLEC
LVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRAALERVT
TLEEQLAGAHQQVSALQQGAGIRDGVAEEEETVDLGPKRLWKDDTGRVEELQGLLEKQNY
ELSQARERLVTLSATVTELEEDLGTARRDLIKSEELSGKHQRDLREALAQKEDMEERITT
LEKRYLAAQREATSIHDLNDKLENELANKESLHRQCEEKARHLQELLEVAEQKLQQTMRK
AETLPEVEAELSQRIAALTKAEERHGNIEEHLRQLEGQLEEKNQELARVRQREKMNEDHN
KRLSDTVDRLLSESNERLQLHLKERMAALEEKGRLSEEIEKLRQEVDQLKGRGGPFVDGI
HSRSHVGSTTDVRFSLSTAAHVPPGLHRRYTALREESAKDWKPAPLPGVLAATTTPAFDS
DPEISDVDEDEPGGLVGTQVDVISPGGHSDAQTLAMMLQEQLDAINQEIRMIQEEKESTE
LRAEEIETRVTSGSMEALNLTQLRKRGSIPTSLTALSLASASPPLSGRSTPKLTSRSAAQ
DLDRMGVMTLPSDLRKHRRKLLSPVSREENREDKATIKCETSPPSSPRTLRLEKLGHPTL
SQEEGKSALEGQDSNPSSSNSSQDSLHKGAKRKGIKSSIGRLFGKKEKGRLIHLSRDATG
HVLLTDSELSLQEPMVPAKLGTQAEKDRRLKKKHQLLEDARRKGMPFAQWDGPTVVSWLE
LWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNALHRLKLRLAIQEMVSLTSPS
APPTSRTSSGNVWVTHEEMETLATSTKTDSEEGSWAQTLAYGDMNHEWIGNEWLPSLGLP
QYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMCLKRLNYDRKELEKRR
EESQHEIKDVLVWTNDQVVHWVQSIGLRDYAGNLHESGVHGALLALDENFDHNTLALVLQ
IPTQNTQARQVMEREFNNLLALGTDRKLDDGEEKVFRRAPSWRKRFRPRDHHSGGMLGTS
AETLPAGFRVSTLGPLQPPPAPPNKIMPEAHSHYLYGHMLSAFRD
NT seq 3558 nt   +upstreamnt  +downstreamnt
atgtgtgaggtgatgcccacaatcaatgagggggaccctctggggcccccccacggtgcc
gatgctgacgccaactttgagcagttgatggtgaacatgctggatgagcgagagaagttg
ctggagtcccttcgggagagtcaggaaactttggtagccacacagagccggctccaagat
gcccttcacgagcgagaccagctccagcgccacctgaactctgcccttccccaggaattt
gccacattaactcgggagctaagcatgtgtcgggagcagcttctggagcgggaggaagag
atatctgagctgaaagcagaacggaataacactaggctgcttctggaacatctggaatgc
ctcgtgtcccgccatgagcggtcattgcgaatgacagtggtaaaacgccaggcccagtca
ccttcaggtgtctccagtgaggtggaggtgctgaaggccctcaagtcactatttgagcac
cacaaggccctggatgagaaggttcgagagcggctccgggcagctctagagcgagttacc
accttggaggagcagttggcaggagctcaccagcaggtgtctgccctgcagcagggggca
ggaattcgggatggagtggcagaagaggaagaaactgtggatctgggaccaaaacgcctg
tggaaagatgacactggccgtgtggaagaactgcaagggctcttggagaagcaaaactat
gagttgagccaggcccgggagcggctggtcaccctgagtgcaactgtgactgagcttgag
gaggacctgggcacagcccgccgagacctcatcaagtcagaggagctgagtggcaagcat
cagcgcgacctccgagaggctctggctcagaaggaggacatggaagagcgaatcaccacc
ctggagaagcgctacttggctgctcagcgagaggccacatccatccatgacctcaatgac
aaactggagaatgagctagccaacaaggagtccctgcaccgccagtgtgaggagaaagcc
cggcatctgcaggagctgttggaagtggcagagcagaagctgcagcagaccatgcgcaag
gcagagaccctgccagaggtggaggccgagctgtctcagagaattgcagctctcaccaag
gctgaggaacgtcatggcaacattgaggaacatctgcggcagctggaagggcagctggag
gagaagaaccaggagctggcaagggtgcgccagcgggagaagatgaacgaggaccacaac
aagcggctgtcagacactgtggaccggttgcttagtgagtccaacgagcgcctgcagctc
cacctcaaggagcgaatggctgccctggaggagaagggccgtctgtctgaggagattgag
aagcttcgccaagaggtggaccagctgaagggtcgaggggggccgtttgtggatggcatc
cactccaggtcacacgtgggcagtacaacagatgtgcggttctcactgagtacagccgcg
cacgtgcctccaggtctgcatcgtcgctatacggctctgagggaagagtctgccaaggac
tggaagccggcaccactgccgggggtgttggctgccaccaccacgcctgcctttgacagt
gaccctgagatctccgatgtggacgaggatgagcctggtggcttggtgggcactcaggtt
gatgtcatctcacctggtggccattctgatgcccaaaccctggccatgatgctccaggaa
caactggatgccatcaaccaggagatcaggatgattcaggaggagaaggaatccactgag
ctgcgtgctgaagagattgagacccgtgtgaccagcggcagcatggaggccctcaacctg
acccagctgcgcaagcgtggctccatccccacctctctgaccgccctgtccctggccagt
gcatctccaccactcagtggccgctccacacccaagctcacttccagaagtgctgcccag
gacctggaccgaatgggggtcatgaccctgcccagcgacttaagaaagcataggaggaag
ctgctgtcgccagtgtctcgggaagagaaccgagaggataaagccaccataaaatgtgag
acttctcctccttcctcacccaggacgctgcggctagagaagcttggccaccctaccctg
agtcaagaagaaggcaagagtgccttggagggccaggacagcaaccccagcagcagcaac
agcagccaggactccctgcacaagggcgccaagcgcaagggcatcaagtcgtccattggc
cgcctgtttgggaagaaggagaagggcaggctgatccacttgagtcgggatgccacaggc
catgttctgctcacagactccgagctcagtctgcaggaaccaatggtacctgccaaattg
gggacccaggcagagaaggaccggcgactgaaaaagaaacaccagctgcttgaagatgct
cgcagaaaaggaatgccttttgcccaatgggatggccccacggtggtctcctggctggag
ctctgggtggggatgcctgcttggtatgtggcggcctgccgggccaatgtcaagagtgga
gccatcatgtctgccctgtcagacacggagatccagcgggagatcggcatcagcaatgcc
ctgcacaggctcaagctccgcctggccatccaggagatggtgtcactgacgagcccctca
gccccgcctacctcaaggacatcttcagggaatgtctgggtgacccacgaagagatggaa
actctggcaacgtctaccaaaacagacagtgaggagggcagttgggcccagaccctggcc
tacggagatatgaatcacgaatggattggaaatgaatggctgcccagcctggggctccct
cagtaccgcagttacttcatggagtgcctagtggatgcacgcatgctggatcacctcacc
aagaaggacctgcgtgtccacctcaagatggtggacagtttccatagaaccagtcttcag
tatggcatcatgtgtctgaagaggctgaactatgaccggaaggagctggagaagaggcgg
gaagagagccagcatgagatcaaggatgtgctggtctggaccaatgaccaggtggttcac
tgggtccagtccatagggctaagggattatgccggaaacctacatgaaagtggtgtgcat
ggtgccctgctggccttggatgaaaacttcgaccacaacacattggccttggttctgcag
atccccacacagaacacccaggcccgccaagtgatggagagagagttcaataacctgttg
gccttgggcacagacaggaaattggatgacggggaagagaaggtgttccgtcgagcaccc
tcctggaggaaacgctttcggcctcgggatcaccatagcggtggcatgttgggcacctca
gcggagaccctccctgcgggcttccgtgtgtccaccctgggtccgctgcagcctccaccc
gccccgcccaacaagatcatgccggaagctcactcccactatctctacggacacatgctc
tccgccttccgggactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (9)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (16)   
   RefSeq(nuc) (8)   
   GenBank (4)   
   EMBL (4)   
Protein domain (3)   
   Pfam (3)   
All databases (37)   

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