KEGG   Rattus norvegicus (rat): 140639
Entry
140639            CDS       T01003                                 
Symbol
Nploc4
Name
(RefSeq) nuclear protein localization protein 4 homolog
  KO
K14015  nuclear protein localization protein 4
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    140639 (Nploc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rno03009]
    140639 (Nploc4)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    140639 (Nploc4)
SSDB
Motif
Pfam: NPL4 zf-NPL4 UN_NPL4 zf-RanBP
Other DBs
NCBI-GeneID: 140639
NCBI-ProteinID: NP_542144
RGD: 620794
Ensembl: ENSRNOG00000036698
UniProt: Q9ES54 A6HLC6
Structure
Position
10:complement(106152756..106208306)
AA seq 608 aa
MAESIIIRVQSPDGVKRITATKRETAATFLKKVAKEFGFQNNGFSVYINRNKTGEITASS
SKSLHLLKIKHGDLLFLFPSSLAGPSSEMETSTSVGLKAFGAPHVVEDEIDQYLSKQDGK
IYRSRDPQLCRHGPLGKCVHCVPLEPFDEDYLNHLEPPVKHMSFHAYIRKLTGGADKGKF
VALENISCKIKSGCEGHLPWPNGICTKCQPSAITLNRQKYRHVDNIMFENHTVADRFLDF
WRKTGNQHFGYLYGRYTEHKDIPLGIRAEVAAIYEPPQIGTQNSLELLEDPKAEVVDEIA
SKLGLRKVGWIFTDLVSEDTRKGTVRYSRNKDTYFLSSEECITAGDFQNKHPNICRLSPD
GHFGSKFVTAVATGGPDNQVHFEGYQVSNQCMALVRDECLLPCKDAPELGYAKESSSEQY
VPDVFYKDIDKFGNEITQLARPLPVEYLIIDITTTFPKDPVYTFSISQNPFPIENRDVLG
ETQDFHSLATYLSQNTSSVFLDTISDFHLLLFLVTNEVMPLQDSISLLLEAVRTRNEELA
QTWKKSEQWATIEQLCSTVGVQLPGLHEFGAVGGSARAATSAMWACQHCTFMNQPGTGHC
EMCSLPRT
NT seq 1827 nt   +upstreamnt  +downstreamnt
atggccgagagcatcataatccgtgtccaatcccccgatggagtgaagaggatcacagca
acaaagagagaaacagccgcaacatttctgaaaaaggttgcaaaggagtttggcttccaa
aacaacggcttctcggtttacatcaatagaaacaagactggagagataacagcatcgtcc
agcaaatccctgcatttgctaaaaatcaagcatggcgatttgttgttcctgttcccctca
agccttgctggaccctcatctgaaatggaaacatcgacctcagtagggttaaaggccttt
ggtgctcctcacgtggttgaagatgagattgatcaatacctcagcaagcaggatgggaag
atttataggagccgagacccacagttatgccgccatggtcccttgggcaagtgtgtgcat
tgtgtcccactggagccatttgatgaagactatctgaaccacttggagcctcctgtgaag
cacatgtccttccatgcctacatccggaagctgactggaggggctgacaaggggaagttc
gttgccctggagaacatcagctgcaagattaagtcaggatgtgagggacacctcccttgg
ccaaatggtatctgtaccaaatgccagcctagtgccatcacattgaacagacagaaatat
agacatgtggacaacattatgtttgagaatcacactgttgctgaccgtttccttgacttc
tggagaaagacaggaaaccaacatttcgggtacttatatggacggtacacagagcacaaa
gacattccccttggcatcagggctgaagtggctgcaatttatgagcctcctcagattggt
acacagaacagcctggagcttctggaagatccaaaagctgaggtggttgacgagattgcc
tccaaacttggcctgaggaaggttggatggatattcacggaccttgtctcagaagatacc
cgaaagggtacagtccgatacagtcggaataaggacacctatttcctgagttcagaagaa
tgcatcactgcaggagactttcaaaacaagcaccccaacatttgccggctctctccggat
ggtcattttggatccaagtttgttactgcagtggccacaggtggtcctgataaccaggtt
cactttgaagggtaccaggtatccaatcagtgcatggcactggtccgagatgagtgtctt
ctaccttgtaaggatgcccctgagctcggctatgccaaggagtccagcagtgaacaatat
gttcctgacgtgttttacaaggacatagacaagtttggcaatgagatcacccagctggcc
cgtcccctgcctgtggagtatctcatcatagatatcacaaccaccttccccaaggatcca
gtttacactttttctatttctcaaaatccgtttcctattgaaaaccgggatgtgctgggt
gagacacaggacttccatagtttggccacctacttgtcccagaatacctcatctgtgttc
ttggataccatctccgacttccatctcctgttgtttctggtcaccaatgaagtcatgcca
ctgcaggacagtatcagcctgctgctagaagccgtcaggaccagaaacgaggagctagca
cagacatggaaaaagtctgaacagtgggccaccattgagcagctgtgcagcactgttggt
gtgcagctcccaggcctccatgagtttggtgcagtcgggggctctgcacgcgctgctacc
tctgccatgtgggcttgtcagcactgcaccttcatgaaccagcctggcacaggccactgc
gagatgtgcagccttccccggacctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
3D Structure (2)   
   PDB (2)   
Protein domain (4)   
   Pfam (4)   
All databases (27)   

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