KEGG   Rattus norvegicus (rat): 140675
Entry
140675            CDS       T01003                                 
Symbol
Gabra4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4 precursor
  KO
K05175  gamma-aminobutyric acid receptor subunit alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04080  Neuroactive ligand-receptor interaction
rno04723  Retrograde endocannabinoid signaling
rno04727  GABAergic synapse
rno04742  Taste transduction
rno05032  Morphine addiction
rno05033  Nicotine addiction
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    140675 (Gabra4)
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    140675 (Gabra4)
   04723 Retrograde endocannabinoid signaling
    140675 (Gabra4)
  09157 Sensory system
   04742 Taste transduction
    140675 (Gabra4)
 09160 Human Diseases
  09165 Substance dependence
   05032 Morphine addiction
    140675 (Gabra4)
   05033 Nicotine addiction
    140675 (Gabra4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    140675 (Gabra4)
Ion channels [BR:rno04040]
 Ligand-gated channels
  GABA-A
   140675 (Gabra4)
SSDB
Motif
Pfam: Neur_chan_LBD Neur_chan_memb CytochromB561_N
Other DBs
NCBI-GeneID: 140675
NCBI-ProteinID: NP_542154
RGD: 621670
Ensembl: ENSRNOG00000002336
UniProt: P28471 A6JD83
Position
14:36944747..37021652
AA seq 552 aa
MVSVQKVPAIVLCSGVSLALLHVLCLATCLNESPGQNSKDEKLCPENFTRILDSLLDGYD
NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEILRLN
NMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFP
MDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSIT
GEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQMQKAKKKISKPPP
EVPAAPVLKEKHTETSLQNTHANLNMRKRTNALVHSESDVNSRTEVGNHSSKTTAAQESS
ETTPKAHLASSPNPFSRANAAETISAAARGLSSAASPSPHGTLQPAPLRSASARPAFGAR
LGRIKTTVNTTGVPGNVSATPPPSAPPPSGSGTSKIDKYARILFPVTFGAFNMVYWVVYL
SKDTMEKSESLM
NT seq 1659 nt   +upstreamnt  +downstreamnt
atggtttctgtccagaaggtacctgcgatcgtgctgtgctccggggtcagcctcgccctc
ctgcacgtcctgtgcctggcgacttgtttaaacgaatccccaggacagaattcaaaggac
gagaaattgtgcccggaaaattttacccgtatcctggacagtttgctggatggttatgac
aacagactgcgtcctggatttgggggtcctgttacagaggtgaaaactgatatatatgtc
accagctttggacccgtttctgatgttgaaatggaatacacaatggatgtgttcttcaga
cagacatggattgacaaaagactgaaatatgatggccccattgaaatcctgaggttgaac
aatatgatggtcaccaaagtttggacccctgatactttcttcaggaatggaaagaaatct
gtctcccataacatgacagctccaaataaactttttagaattatgagaaatggcactatt
ttatacacaatgagactcaccataagtgcggagtgtcccatgagactggtggattttcct
atggacggtcatgcctgccctttgaaatttgggagttatgcatatcccaagagtgagatg
atctacacctggaccaaaggccctgagaagtcagtggaggtaccaaaggagtcctcgagc
ttagttcagtatgatctaattggccagactgtatccagtgagactatcaaatctattaca
ggtgaatacattgttatgaccgtgtactttcacctcagacggaagatgggctattttatg
attcagacatatatcccgtgcatcatgacagtgatcctttctcaagtttccttctggatc
aataaggagtctgttccagccagaactgtatttggaataaccacagtcctcacgatgacc
accctaagcatcagtgctcggcattctttgcccaaagtgtcctatgcgactgccatggat
tggttcatagctgtctgttttgcttttgtattttcggctcttattgagtttgctgctgtc
aactatttcaccaacattcaaatgcaaaaagccaaaaagaagatatcaaaacctcctcca
gaagttccagctgccccagtactgaaggaaaaacatacagaaacatctcttcagaataca
catgctaatttgaacatgaggaaaagaacaaatgcattagtccactcagaatcagatgtc
aacagcagaactgaggtggggaaccattccagcaagaccaccgctgcccaggagtcttct
gaaaccactcctaaggcccacttggcttccagtccaaatccattcagcagggcaaatgca
gctgagactatctctgcagcagcaagaggtctttcgtctgccgcatcgccctctcctcac
gggacactgcagccagctcctttgcggtcggcgtctgctcgcccggcatttggagctaga
cttgggcgcattaagacaacagttaatacgacaggggtgcctgggaatgtgtcagccaca
cctcctccctctgctccaccaccttctggatctggcacaagtaaaatagacaaatatgct
cgtattctctttccagtcacatttggggcatttaacatggtctactgggtggtttattta
tctaaggacaccatggagaaatcagaaagtctaatgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

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