KEGG   Rattus norvegicus (rat): 140941
Entry
140941            CDS       T01003                                 
Symbol
Siah1
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04115  p53 signaling pathway
rno04120  Ubiquitin mediated proteolysis
rno04137  Mitophagy - animal
rno04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    140941 (Siah1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    140941 (Siah1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    140941 (Siah1)
  09143 Cell growth and death
   04115 p53 signaling pathway
    140941 (Siah1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    140941 (Siah1)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     140941 (Siah1)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    140941 (Siah1)
SSDB
Motif
Pfam: Sina_TRAF Sina_ZnF Sina_RING Trm112p
Other DBs
NCBI-GeneID: 140941
NCBI-ProteinID: NP_543181
RGD: 620449
Ensembl: ENSRNOG00000015143
UniProt: Q920M9 A9UK92
Position
19:36552165..36575773
AA seq 282 aa
MSRQTATALPTGTSKCPPSQRVPALTGTTASNNDLASLFECPVCFDYVLPPILQCQSGHL
VCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHTEKAEHEEL
CEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVM
MQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATP
RSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq 849 nt   +upstreamnt  +downstreamnt
atgagccgtcagactgctacagcattacccaccggcacctcaaagtgtccaccatcccag
agggtacctgccttgactggcacaactgcatccaacaatgacttggcgagtcttttcgag
tgtcctgtctgctttgactatgtattgccacctattcttcagtgtcagagtggccatctt
gtttgtagcaactgtcgccccaaacttacatgttgtcccacctgccggggcccgttggga
tccattcgcaacttggctatggagaaagtggccaactccgtactcttcccttgtaaatat
gcctcttctggatgtgagataactctgccgcacaccgaaaaggcagagcacgaggagctc
tgtgagttcaggccttactcctgcccctgccctggtgcttcctgtaagtggcaaggctcc
ttggatgctgtcatgccccacctgatgcatcagcacaagtccattaccaccctgcaagga
gaagatatagttttccttgctacagacattaaccttcctggtgctgttgactgggtgatg
atgcagtcttgttttggctttcatttcatgttagtcttggagaaacaagaaaaatacgat
ggccatcagcagttctttgcgattgtacagctgataggaacacgcaagcaagctgaaaat
tttgcatatcgacttgagctgaatggtcataggcggcgattgacttgggaagccacccct
cggtctattcatgagggaattgcaacagccatcatgaatagtgactgcctagtgtttgac
accagcattgcacagctctttgcagaaaatggcaatttaggcatcaatgtaactatttcc
atgtgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (13)   
   RefSeq(nuc) (3)   
   GenBank (5)   
   EMBL (5)   
Protein domain (4)   
   Pfam (4)   
All databases (38)   

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