KEGG   Rattus norvegicus (rat): 140945
Entry
140945            CDS       T01003                                 
Symbol
Rtn3
Name
(RefSeq) reticulon-3 isoform A
  KO
K20723  reticulon-3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05010  Alzheimer disease
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    140945 (Rtn3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    140945 (Rtn3)
   03036 Chromosome and associated proteins [BR:rno03036]
    140945 (Rtn3)
Membrane trafficking [BR:rno04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    140945 (Rtn3)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    140945 (Rtn3)
SSDB
Motif
Pfam: Reticulon
Other DBs
NCBI-GeneID: 140945
NCBI-ProteinID: NP_543185
RGD: 620988
Ensembl: ENSRNOG00000021202
UniProt: Q6RJR6
Position
1:complement(214041838..214098644)
AA seq 940 aa
MAESSAATQSPSVSSSSSGAEPSTLGGGGGSPGACPALGAKSCGSSCAVGLSSLCSDEPP
SKIMTSSFLSSSEIYNPDPTTPLGSETLGSHLVAKDGKDPLVLLDKKTLDSPQGTNKDRV
DTPVSLAADIPCSHPSIPDSFPEQPTFLSKETDPTEEWVVKNQEPKNPSEVPSGEDRSAL
DLGQRKAEHICTHSLSPSEPAVASVEKDSPESPFEVIIDKATFDREFKDLYKESTDDLGG
WAAHGDRESPADLLEMNDKVFPLRNKEAGRYPSSALLGRQFSHTTAALEEVSRCVNDMHN
FTNEILTWDLDPQAKQQADKSPCTTESTGLDRSEHRSEIPVINLKTSPQQKMPVCSFNGS
TPITRSTGDWTETFTEGKPVKGYLSSTKEAGGKGVPDSSQPISGSGAATVEVTLPDLRGT
WPNSVLGEVTEVDSSGESDDTVIEDTTENPSVKNNKVLPEKSDSLPSAAVKTSERENKET
TSHETVRSEMYENSEQQQAHAETPTQRSLEGQMSPQVPNMLNEVIPENLAMTDTTRVCSA
APPSVLSETGFSLTVPASAKSESLLGKNVEDTDGSSPEDLMAALTGTEEKGTVDKEKGDV
LEAVLEKIANVKNTLPVELLHENKLSSSETKNTKSKYSEHSRETNGGAPKVSSDLEQEQL
TIRAIKELGAKQVQAERMSPGGKLKRTFDPQSGPQNSSDILEHTDITTGSDLGIPKKPTI
IKDTRIDSISSLTKTETVNKHVLARLLSDFPVHDLIFWRDVKKTGFVFGTTLIMLLSLAA
FSVISVVSYLILALLSVTISFRVYKSVIQAVQKSEEGHPFKAYLDVDITLSSEAFHSYMN
AAMVHVNKALKLIIRLFLVEDLVDSLKLAVFMWLMTYVGAVFNGITLLILAELLVFSVPI
VYEKYKTQIDHYVGIARDQTKSIVEKIQAKLPGIAKKKAE
NT seq 2823 nt   +upstreamnt  +downstreamnt
atggcggagtcatcggcggccactcagtctccgtcagtctcctcgtcgtcctccggggcc
gagccgtcaacgcttggcggcggcggcgggagccctggagcctgccccgccctgggggcg
aagagctgcggctcctcctgtgcggtgggattgagctctctttgctctgatgagccacca
tcaaaaattatgacttcctcctttctttcatcttctgaaatatataaccctgaccctaca
acaccacttggaagtgaaacattaggcagccatcttgtagctaaagacggaaaagatccc
ttggttcttctagataagaaaactctggactcacctcaggggaccaacaaggacagagta
gacactccggtttctcttgcagctgacattccttgcagccacccttctattccagacagt
ttcccagaacaacctacttttctttcaaaggaaactgatccaacagaagagtgggtagtt
aaaaaccaagaacccaagaacccaagtgaagttccaagtggagaggacagaagtgcactg
gatcttgggcagcgtaaggcagaacacatttgtacacattccttgtctccatctgaacct
gcagtagccagtgtagaaaaagattctcctgagtcaccatttgaagtaattattgacaaa
gcaacatttgacagagaatttaaagatttgtataaggaaagcacagatgatttgggtggc
tgggcagctcacggtgacagagaatccccagcagatttattggaaatgaatgacaaagtg
tttccactgagaaataaagaggcagggcgttacccatcctctgcactgctcggtagacaa
ttctcacacactacagcagcactggaagaagtgtctagatgtgtgaatgatatgcataac
tttactaatgaaatactgacttgggacttagatccccaagcaaaacaacaggcggacaaa
tcaccttgcaccacagaaagtacaggactagacaggagtgaacatcgctcagaaattcca
gttataaatcttaaaacaagccctcaacagaaaatgcctgtatgttcttttaatgggagc
actcccattactagatccacaggtgactggacagaaacatttacagaaggaaaacctgta
aaaggctacctcagctccacaaaagaagctggtggcaaaggtgtaccagacagttctcag
cctatctcaggctctggagcagccacagtggaagtgactttacctgacctgaggggtacc
tggcctaactctgtgctaggggaagtcacagaggttgatagttctggggaatctgatgac
acagtaatagaggacaccacagaaaatccctcagttaagaacaacaaagttttgccagaa
aaatctgactcccttccaagtgctgctgtaaaaacaagtgaaagggaaaacaaagagact
accagtcatgaaactgtgaggagtgaaatgtatgaaaactctgagcagcagcaggcccat
gcagaaactcctactcagaggagtctggaaggtcagatgtctccacaagtacctaatatg
ctgaatgaagtcatacctgaaaatcttgctatgactgacacaaccagagtttgctcagca
gcacctccaagtgttcttagtgagactggattctcactaactgtgccagcttctgccaag
tcagaatctttgcttggaaaaaatgttgaagatacagatggttcctctccagaggacttg
atggctgccctcacaggaactgaggagaaggggacagtggataaagagaaaggtgatgtt
ttggaagcagtgttagagaagatagcaaacgttaaaaacactttgcctgtggaactcttg
catgaaaataagctaagtagttctgaaaccaaaaatactaaaagcaaatacagtgaacac
agcagagaaacaaatggaggtgcccccaaggtgtcttccgacttagagcaggagcagctc
accattagagccattaaagaattaggggctaagcaggtgcaggctgaaagaatgtctcct
ggaggaaaactcaagcgaacctttgatccacagtctgggccacagaattcatctgacatc
ctagaacacacagatatcacaactggatctgatcttgggattcccaaaaagcctactatc
atcaaagacactagaatagattctatttccagccttaccaagactgaaacagttaacaag
catgttctagcaagacttctcagtgatttcccagtgcatgatctgattttctggcgagat
gtgaagaagactgggtttgtctttggcaccacgctgatcatgctgctctctctggcagct
ttcagtgttatcagtgtggtctcttacctcatcctggctctactctctgtcaccatcagc
ttcagagtctacaagtctgtcatccaagctgtgcagaagtcagaagaaggacatccattc
aaggcctacctggatgtggacattacactgtcctcagaagctttccacagctacatgaat
gctgcaatggtgcatgtcaacaaggccctcaaactcattattcgtctctttctggtagaa
gacttggttgactccttgaagctggctgtcttcatgtggctgatgacctacgtcggtgct
gtttttaacggaattacccttctgattctcgccgagctgctggttttcagcgtcccaatt
gtctatgagaagtataagacacagattgaccactatgttgggattgcccgggatcagacc
aagtcaattgttgaaaagatccaagcaaagcttcctggaatcgccaaaaaaaaggcagaa
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (19)   
   RefSeq(nuc) (5)   
   GenBank (7)   
   EMBL (7)   
Protein domain (1)   
   Pfam (1)   
All databases (38)   

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